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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3505 and Dsui_3506 are separated by 93 nucleotides
Dsui_3506 and Dsui_3507 are separated by 110 nucleotides
Dsui_3507 and Dsui_3508 are separated by 146 nucleotides
Dsui_3508 and Dsui_3509 are separated by 47 nucleotides
Dsui_3505: Dsui_3505 - Protein of unknown function (DUF3478), at 3,770,512 to 3,770,868
_3505
Dsui_3506: Dsui_3506 - putative permease, DMT superfamily, at 3,770,962 to 3,771,819
_3506
Dsui_3507: Dsui_3507 - ring-hydroxylating dioxygenase, large terminal subunit, at 3,771,930 to 3,773,039
_3507
Dsui_3508: Dsui_3508 - exodeoxyribonuclease VII, small subunit, at 3,773,186 to 3,773,452
_3508
Dsui_3509: Dsui_3509 - geranylgeranyl pyrophosphate synthase, at 3,773,500 to 3,774,408
_3509
Group
Condition
Dsui
_3505
Dsui
_3506
Dsui
_3507
Dsui
_3508
Dsui
_3509
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.0
-6.6
+0.2
-0.5
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.0
-6.2
+0.0
+0.2
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.0
-4.6
+0.2
-0.4
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.0
-4.4
+0.2
-0.1
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
-4.1
+0.3
-0.3
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.0
-4.1
+0.2
+0.0
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
-3.9
+0.3
-0.3
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.4
-1.9
-0.3
-1.0
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
-3.4
+0.1
+0.1
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
-3.2
+0.4
-0.5
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
-3.6
+0.3
+0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.2
-1.8
+0.4
-1.2
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.2
-2.2
-0.2
-0.0
N.D.
alp rich
rich media
+0.1
-0.4
-0.1
-2.1
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
-3.1
+0.1
+0.3
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.0
-2.0
-0.0
-0.3
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
-2.9
+0.3
+0.2
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
-3.3
+0.1
+1.0
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
-1.3
+0.4
-1.4
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
-0.6
+0.0
-1.2
N.D.
stress
rich media with sodium chlorite 0.16 mM
-0.1
-0.3
-0.2
-1.3
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
-0.7
-0.0
-0.8
N.D.
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.2
-0.9
-0.1
-0.5
N.D.
carbon source
defined media with 40 mM sodium acetate
+0.1
-0.4
-0.2
-1.2
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
-0.4
+0.2
-0.4
-1.0
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.3
-1.9
-0.1
+0.8
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.2
-1.4
+0.6
-0.5
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.1
-1.6
+0.6
+0.0
N.D.
stress
ALP with Fusidic 0.02 mg/ml
+0.1
+0.1
-0.1
+1.5
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
+0.7
+0.1
+1.1
+0.2
N.D.
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