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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3474 and Dsui_3475 are separated by 58 nucleotides
Dsui_3475 and Dsui_3476 are separated by 11 nucleotides
Dsui_3476 and Dsui_3477 are separated by 15 nucleotides
Dsui_3477 and Dsui_3478 are separated by 246 nucleotides
Dsui_3474: Dsui_3474 - chemotaxis protein histidine kinase-like protein, at 3,735,852 to 3,738,071
_3474
Dsui_3475: Dsui_3475 - methyl-accepting chemotaxis protein, at 3,738,130 to 3,740,301
_3475
Dsui_3476: Dsui_3476 - chemotaxis signal transduction protein, at 3,740,313 to 3,740,831
_3476
Dsui_3477: Dsui_3477 - PAS domain S-box, at 3,740,847 to 3,742,106
_3477
Dsui_3478: Dsui_3478 - hypothetical protein, at 3,742,353 to 3,742,664
_3478
Group
Condition
Dsui
_3474
Dsui
_3475
Dsui
_3476
Dsui
_3477
Dsui
_3478
stress
ALP with perchlorate 6 mM
-1.5
-1.3
N.D.
-2.0
-2.5
stress
ALP with Chloride 75 mM
-1.5
-1.2
N.D.
-2.1
-2.4
stress
ALP with perchlorate 3 mM
-1.5
-1.0
N.D.
-2.2
-2.5
stress
ALP with nitrite 0.3 mM
-1.3
-1.7
N.D.
-1.5
-2.3
stress
ALP with perchlorate 12 mM
-1.5
-1.2
N.D.
-1.9
-2.3
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-1.3
-1.8
N.D.
-1.5
-2.2
stress
ALP with Bacitracin 0.2 mg/ml
-1.3
-1.0
N.D.
-1.9
-2.4
alp richb
ALP
-1.2
-1.7
N.D.
-1.5
-2.2
stress
ALP with nitrite 0.15 mM
-1.2
-1.7
N.D.
-1.5
-2.2
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.2
-1.7
N.D.
-1.5
-2.1
stress
ALP with sodium fluoride 40 mM
-1.2
-1.6
N.D.
-1.4
-2.2
stress
ALP with nitrate 75 mM
-1.2
-1.6
N.D.
-1.4
-2.1
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.3
-1.0
N.D.
-1.8
-2.2
stress
ALP with Fusidic 0.02 mg/ml
-1.3
-0.8
N.D.
-1.8
-2.2
carbon source
L-Lactate (C)
-1.2
-0.9
N.D.
-1.8
-2.2
stress
ALP with Fusidic 0.01 mg/ml
-1.2
-0.9
N.D.
-1.8
-2.2
carbon source
D,L-Lactate (C)
-1.2
-0.8
N.D.
-1.8
-2.2
stress
ALP with Cisplatin 0.0009 mg/ml
-1.1
-1.5
N.D.
-1.3
-2.2
carbon source
D,L-Lactate (C)
-1.2
-0.8
N.D.
-1.7
-2.2
carbon source
pyruvate (C)
-1.2
-0.8
N.D.
-1.7
-2.2
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.2
-1.7
N.D.
-1.5
-1.4
stress
ALP with nitrate 50 mM
-1.1
-1.7
N.D.
-1.5
-1.5
stress
ALP with sodium fluoride 30 mM
-1.0
-1.5
N.D.
-1.3
-2.0
stress
ALP with Fusidic 0.007 mg/ml
-1.3
-1.0
N.D.
-1.8
-1.5
carbon source
L-Lactate (C)
-1.1
-0.7
N.D.
-1.6
-2.1
stress
ALP with Zinc 2 mM
-0.9
-1.4
N.D.
-1.2
-2.1
carbon source
pyruvate (C)
-1.2
-0.9
N.D.
-1.2
-2.2
stress
ALP with nitrite 0.45 mM
-1.3
-1.7
N.D.
-1.5
-1.0
stress
ALP with Zinc 1 mM
-1.1
-1.6
N.D.
-1.3
-1.4
carbon source
D-Lactate (C)
-1.1
-0.4
N.D.
-1.6
-2.1
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