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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3435 and Dsui_3436 are separated by 1059 nucleotides
Dsui_3436 and Dsui_3437 overlap by 4 nucleotides
Dsui_3437 and Dsui_3438 are separated by 13 nucleotides
Dsui_3438 and Dsui_3439 are separated by 145 nucleotides
Dsui_3435: Dsui_3435 - hypothetical protein, at 3,687,424 to 3,688,278
_3435
Dsui_3436: Dsui_3436 - beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase, at 3,689,338 to 3,690,228
_3436
Dsui_3437: Dsui_3437 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 3,690,225 to 3,693,257
_3437
Dsui_3438: Dsui_3438 - beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase, at 3,693,271 to 3,694,170
_3438
Dsui_3439: Dsui_3439 - methyl-accepting chemotaxis protein, at 3,694,316 to 3,695,965
_3439
Group
Condition
Dsui
_3435
Dsui
_3436
Dsui
_3437
Dsui
_3438
Dsui
_3439
stress
ALP with Bacitracin 0.2 mg/ml
-1.3
-0.3
-0.1
-0.3
-0.4
stress
ALP with perchlorate 6 mM
-1.4
+0.1
+0.0
-0.2
-0.7
carbon source
D-Lactate (C)
-1.0
-0.3
-0.1
-0.3
-0.5
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.3
-0.1
-0.1
-0.0
-0.4
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-1.3
+0.0
-0.2
-0.1
-0.3
carbon source
L-Lactate (C)
-1.1
+0.1
+0.0
-0.4
-0.5
stress
ALP with Cobalt chloride 0.2 mM
-1.0
-0.4
-0.1
+0.2
-0.4
stress
ALP with Cisplatin 0.0009 mg/ml
-1.0
+0.3
-0.2
-0.2
-0.6
stress
ALP with perchlorate 3 mM
-1.4
+0.4
-0.1
-0.2
-0.4
stress
ALP with nitrite 0.15 mM
-1.3
+0.1
-0.2
+0.1
-0.4
stress
ALP with perchlorate 12 mM
-1.3
+0.2
+0.1
-0.3
-0.4
stress
ALP with Chloride 75 mM
-1.3
+0.3
-0.1
-0.2
-0.3
carbon source
D,L-Lactate (C)
-1.0
+0.2
-0.2
-0.3
-0.3
stress
ALP with nitrite 0.45 mM
-1.3
+0.3
-0.2
+0.1
-0.5
stress
ALP with Zinc 2 mM
-1.0
+0.2
-0.2
+0.0
-0.5
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.2
+0.3
-0.1
-0.2
-0.3
stress
ALP with Cisplatin 0.0008 mg/ml
-1.0
+0.2
+0.1
-0.1
-0.5
alp richb
ALP
-1.3
+0.3
-0.2
+0.0
-0.2
carbon source
D,L-Lactate (C)
-1.1
+0.5
-0.1
-0.3
-0.3
stress
ALP with nitrite 0.3 mM
-1.3
+0.5
-0.1
-0.0
-0.4
stress
ALP with nitrate 50 mM
-1.3
+0.2
-0.1
+0.1
-0.2
carbon source
pyruvate (C)
-1.0
+0.5
-0.0
-0.2
-0.4
carbon source
propionate (C)
-0.8
+0.5
-0.2
-0.3
-0.4
stress
ALP with Fusidic 0.007 mg/ml
-1.1
+0.7
+0.0
-0.3
-0.4
carbon source
D-Lactate (C)
-0.9
+0.7
-0.1
-0.3
-0.6
carbon source
R2A with sodium pyruvate
-0.1
-1.4
+0.2
+0.2
+0.1
stress
ALP with copper (II) chloride 0.6 mM
+0.1
+0.5
-0.2
-0.3
-1.1
stress
ALP with Fusidic 0.02 mg/ml
-1.1
+0.6
+0.0
-0.3
+0.0
stress
ALP with Zinc 1 mM
-1.1
+0.6
-0.0
+0.1
-0.2
stress
ALP with Fusidic 0.01 mg/ml
-1.0
+0.5
+0.3
-0.3
-0.1
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