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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3410 and Dsui_3411 are separated by 21 nucleotides
Dsui_3411 and Dsui_3412 are separated by 61 nucleotides
Dsui_3412 and Dsui_3413 are separated by 6 nucleotides
Dsui_3413 and Dsui_3414 are separated by 1 nucleotides
Dsui_3410: Dsui_3410 - serine/threonine protein phosphatase, at 3,663,215 to 3,663,955
_3410
Dsui_3411: Dsui_3411 - hypothetical protein, at 3,663,977 to 3,664,288
_3411
Dsui_3412: Dsui_3412 - putative signal transduction protein, at 3,664,350 to 3,665,246
_3412
Dsui_3413: Dsui_3413 - Fe-S oxidoreductase, at 3,665,253 to 3,666,515
_3413
Dsui_3414: Dsui_3414 - FAD/FMN-dependent dehydrogenase, at 3,666,517 to 3,667,617
_3414
Group
Condition
Dsui
_3410
Dsui
_3411
Dsui
_3412
Dsui
_3413
Dsui
_3414
carbon source
D-Lactate (C)
-0.0
+0.0
+0.2
-4.6
-4.3
carbon source
D-Lactate (C)
-0.2
+0.2
+0.2
-4.3
-4.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
+0.8
+0.0
-2.3
-2.6
stress
ALP with copper (II) chloride 0.6 mM
-0.3
+0.4
+0.1
-2.0
-1.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
+0.5
+0.0
-1.8
-2.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.0
+0.6
+0.1
-1.9
-2.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.1
-0.4
+0.0
-1.3
-1.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
+0.6
-0.2
-1.4
-1.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.1
+0.4
+0.1
-1.7
-1.9
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
+0.9
-0.1
-1.5
-2.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.1
+0.7
+0.2
-1.7
-1.8
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.1
+0.4
+0.1
-1.1
-1.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.0
+0.1
-0.1
-0.9
-1.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.1
+0.6
+0.2
-1.2
-1.8
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.0
+0.3
-0.1
-0.8
-1.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.2
+0.5
+0.1
-1.2
-1.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.0
+0.9
-0.0
-1.3
-1.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.7
+0.1
-1.5
-1.5
anaerobic
Anaero. lactate (C), nitrate electron acceptor
+0.2
+0.0
-0.2
-0.5
-1.4
carbon source
defined media with 30 mM sodium lactate
+0.3
-0.2
+0.0
-0.7
-1.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.0
+0.6
+0.1
-1.1
-1.2
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.1
+0.3
+0.1
-0.3
-1.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.1
+0.6
+0.2
-0.8
-1.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.1
+0.9
+0.1
-1.1
-0.9
carbon source
propionate (C)
-0.2
+0.3
+0.2
+1.1
+1.0
carbon source
propionate (C)
+0.2
+0.4
+0.4
+0.9
+1.1
stress
ALP with Fusidic 0.02 mg/ml
+0.3
+0.1
+0.1
+1.3
+1.4
stress
ALP with Fusidic 0.007 mg/ml
+0.2
+0.0
+0.1
+1.3
+1.5
stress
ALP with Nickel (II) chloride 2.5 mM
+0.2
+0.8
+0.8
+1.0
+0.7
stress
ALP with Fusidic 0.01 mg/ml
+0.2
+0.2
+0.0
+1.7
+1.6
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