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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3393 and Dsui_3394 are separated by 186 nucleotides
Dsui_3394 and Dsui_3395 are separated by 64 nucleotides
Dsui_3395 and Dsui_3396 are separated by 134 nucleotides
Dsui_3396 and Dsui_3397 are separated by 492 nucleotides
Dsui_3393: Dsui_3393 - Kef-type K+ transport system, membrane component, at 3,637,154 to 3,638,398
_3393
Dsui_3394: Dsui_3394 - P-type ATPase, translocating, at 3,638,585 to 3,641,332
_3394
Dsui_3395: Dsui_3395 - arabinose efflux permease family protein, at 3,641,397 to 3,642,602
_3395
Dsui_3396: Dsui_3396 - transcriptional regulator, at 3,642,737 to 3,643,609
_3396
Dsui_3397: Dsui_3397 - Protein of unknown function (DUF1780), at 3,644,102 to 3,644,728
_3397
Group
Condition
Dsui
_3393
Dsui
_3394
Dsui
_3395
Dsui
_3396
Dsui
_3397
stress
ALP with nitrate 50 mM
-4.6
-0.7
N.D.
-1.1
-1.2
stress
ALP with nitrate 75 mM
-4.9
-0.5
N.D.
-0.5
-1.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-5.7
-0.4
N.D.
-0.0
-0.3
stress
ALP with Chloride 75 mM
-3.2
-0.6
N.D.
-0.6
-1.8
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-5.4
-0.3
N.D.
+0.0
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-4.3
-0.1
N.D.
-1.3
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-5.1
-0.3
N.D.
+0.2
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-4.8
-0.2
N.D.
-0.3
+0.0
carbon source
D-Lactate (C)
-1.7
-0.4
N.D.
-1.7
-1.5
stress
ALP with Fusidic 0.02 mg/ml
-2.1
+0.1
N.D.
-1.6
-1.6
stress
ALP with perchlorate 12 mM
-1.9
-0.4
N.D.
-1.1
-1.7
stress
ALP with Bacitracin 0.2 mg/ml
-2.1
-0.2
N.D.
-1.2
-1.7
stress
ALP with Zinc 2 mM
-2.5
-0.9
N.D.
-0.7
-0.9
stress
ALP with nitrite 0.3 mM
-2.1
-0.6
N.D.
-1.0
-1.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.2
-0.1
N.D.
-0.0
-0.5
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.5
-0.5
N.D.
-1.3
-1.5
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-3.1
-0.5
N.D.
+0.1
-1.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
-4.0
-0.2
N.D.
-0.1
-0.5
carbon source
propionate (C)
-2.0
-0.5
N.D.
-1.1
-1.1
stress
ALP with copper (II) chloride 0.6 mM
-4.6
-0.6
N.D.
+0.4
+0.2
carbon source
pyruvate (C)
-1.6
-0.1
N.D.
-1.7
-1.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.9
-0.2
N.D.
-0.1
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.7
-0.2
N.D.
-0.2
-0.5
carbon source
L-Lactate (C)
-1.9
-0.4
N.D.
-0.6
-1.6
stress
ALP with Nickel (II) chloride 3.5 mM
-3.1
-0.3
N.D.
-0.4
-0.8
carbon source
D,L-Lactate (C)
-1.8
-0.6
N.D.
-0.6
-1.5
stress
ALP with Fusidic 0.01 mg/ml
-2.2
-0.3
N.D.
-0.3
-1.6
stress
ALP with perchlorate 6 mM
-2.1
-0.2
N.D.
-0.1
-2.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.8
-0.2
N.D.
+0.2
-0.4
stress
ALP with Cisplatin 0.0009 mg/ml
-2.4
-0.9
N.D.
+0.5
-1.1
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