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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3382 and Dsui_3383 are separated by 386 nucleotides
Dsui_3383 and Dsui_3384 are separated by 21 nucleotides
Dsui_3384 and Dsui_3385 are separated by 36 nucleotides
Dsui_3385 and Dsui_3386 are separated by 196 nucleotides
Dsui_3382: Dsui_3382 - universal stress protein UspA-like protein, at 3,624,257 to 3,625,168
_3382
Dsui_3383: Dsui_3383 - cAMP-binding protein, at 3,625,555 to 3,626,256
_3383
Dsui_3384: Dsui_3384 - transporter, monovalent cation:proton antiporter-2 (CPA2) family, at 3,626,278 to 3,628,242
_3384
Dsui_3385: Dsui_3385 - Protein of unknown function (DUF1504), at 3,628,279 to 3,629,547
_3385
Dsui_3386: Dsui_3386 - response regulator, at 3,629,744 to 3,630,403
_3386
Group
Condition
Dsui
_3382
Dsui
_3383
Dsui
_3384
Dsui
_3385
Dsui
_3386
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-1.1
-0.1
+0.1
N.D.
N.D.
stress
ALP with Fusidic 0.02 mg/ml
-0.4
+0.2
-0.7
N.D.
N.D.
stress
ALP with Fusidic 0.007 mg/ml
-0.4
+0.2
-0.7
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.5
-0.8
+0.9
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.1
+0.5
+0.3
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
-0.5
+0.6
-0.0
N.D.
N.D.
stress
ALP with Cobalt chloride 0.2 mM
-0.5
+0.5
+0.2
N.D.
N.D.
carbon source
defined media with 40 mM sodium acetate
-0.4
+0.4
+0.3
N.D.
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.4
+0.3
+0.6
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.6
+0.7
+0.3
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
+0.5
+0.4
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
-0.7
+0.9
N.D.
N.D.
stress
ALP with nitrate 75 mM
-0.4
+0.6
+0.4
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
-0.5
+1.0
N.D.
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.4
+0.6
-0.3
N.D.
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.2
+0.3
+0.7
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.5
-0.6
+0.9
N.D.
N.D.
stress
ALP with Zinc 2 mM
-0.2
+0.7
+0.3
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
+0.7
+0.4
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
+0.9
+0.5
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.1
+0.7
+0.4
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.2
+0.8
+0.5
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.3
+0.9
+0.6
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
+0.9
+0.4
N.D.
N.D.
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.1
+0.3
+0.8
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
+1.0
+0.5
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.3
+0.9
+0.6
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
+0.9
+0.6
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.1
+0.9
+0.6
N.D.
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
+0.3
+1.0
+0.6
N.D.
N.D.
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