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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3329 and Dsui_3330 are separated by 36 nucleotides
Dsui_3330 and Dsui_3331 are separated by 4 nucleotides
Dsui_3331 and Dsui_3332 are separated by 205 nucleotides
Dsui_3332 and Dsui_3333 are separated by 165 nucleotides
Dsui_3329: Dsui_3329 - hypothetical protein, at 3,569,064 to 3,569,381
_3329
Dsui_3330: Dsui_3330 - hypothetical protein, at 3,569,418 to 3,569,675
_3330
Dsui_3331: Dsui_3331 - adenylosuccinate lyase, at 3,569,680 to 3,571,047
_3331
Dsui_3332: Dsui_3332 - glutathione S-transferase, at 3,571,253 to 3,571,861
_3332
Dsui_3333: Dsui_3333 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 3,572,027 to 3,573,034
_3333
Group
Condition
Dsui
_3329
Dsui
_3330
Dsui
_3331
Dsui
_3332
Dsui
_3333
stress
ALP with nitrite 0.45 mM
-0.1
-1.9
N.D.
+0.4
-2.1
stress
ALP with Cobalt chloride 0.25 mM
+0.1
-1.6
N.D.
-0.8
-1.1
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.1
-2.0
N.D.
+0.4
-1.3
stress
ALP with Cisplatin 0.0008 mg/ml
-0.1
-1.7
N.D.
+0.1
-1.0
stress
ALP with Cobalt chloride 0.2 mM
+0.2
-1.7
N.D.
-0.1
-1.1
stress
ALP with nitrite 0.3 mM
-0.2
-2.0
N.D.
+0.4
-0.6
stress
ALP with nitrite 0.15 mM
-0.0
-1.9
N.D.
+0.3
-0.8
stress
ALP with Zinc 1 mM
-0.0
-1.8
N.D.
+0.3
-0.7
stress
ALP with nitrate 75 mM
-0.1
-1.9
N.D.
+0.5
-0.7
stress
ALP with Nickel (II) chloride 3.5 mM
+0.1
-1.5
N.D.
+0.2
-0.9
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.1
-1.9
N.D.
+0.6
-0.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
-1.5
N.D.
-0.2
-0.4
stress
ALP with sodium fluoride 40 mM
+0.1
-1.9
N.D.
+0.4
-0.5
stress
ALP with nitrate 50 mM
-0.0
-2.0
N.D.
+0.4
-0.2
alp richb
ALP
-0.1
-1.9
N.D.
+0.5
-0.3
stress
ALP with Nickel (II) chloride 1.5 mM
+0.1
-1.3
N.D.
+0.3
-0.8
stress
ALP with Zinc 2 mM
+0.1
-1.6
N.D.
+0.6
-0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
-1.1
N.D.
+0.1
-0.3
stress
ALP with Cisplatin 0.0009 mg/ml
-0.1
-1.8
N.D.
+0.0
+0.3
stress
ALP with Cisplatin 0.0007 mg/ml
+0.3
-1.4
N.D.
+0.0
-0.4
stress
ALP with Nickel (II) chloride 2.5 mM
+0.4
-0.8
N.D.
+0.2
-1.1
stress
ALP with perchlorate 3 mM
+0.1
-0.1
N.D.
+0.3
-1.3
stress
ALP with Chloride 75 mM
+0.2
-0.1
N.D.
+0.5
-1.4
stress
ALP with copper (II) chloride 0.6 mM
+0.5
-0.5
N.D.
+0.1
-0.8
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.0
-1.1
N.D.
+0.9
-0.6
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.2
+0.6
N.D.
-0.5
-0.7
carbon source
D,L-Lactate (C)
+0.3
+0.2
N.D.
+0.2
-1.0
carbon source
propionate (C)
+0.3
+0.6
N.D.
+0.0
-0.9
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.3
+0.8
N.D.
-0.5
+0.5
ALP with 3 all (C)s
+0.4
+1.0
N.D.
+0.2
+0.3
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