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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3248 and Dsui_3249 are separated by 18 nucleotides
Dsui_3249 and Dsui_3250 are separated by 24 nucleotides
Dsui_3250 and Dsui_3251 are separated by 214 nucleotides
Dsui_3251 and Dsui_3252 are separated by 48 nucleotides
Dsui_3248: Dsui_3248 - argininosuccinate synthase, at 3,488,583 to 3,489,812
_3248
Dsui_3249: Dsui_3249 - ornithine carbamoyltransferase, at 3,489,831 to 3,490,754
_3249
Dsui_3250: Dsui_3250 - acetylornithine/succinylornithine aminotransferase, at 3,490,779 to 3,491,951
_3250
Dsui_3251: Dsui_3251 - ATPase involved in chromosome partitioning, at 3,492,166 to 3,492,930
_3251
Dsui_3252: Dsui_3252 - hypothetical protein, at 3,492,979 to 3,493,197
_3252
Group
Condition
Dsui
_3248
Dsui
_3249
Dsui
_3250
Dsui
_3251
Dsui
_3252
stress
ALP with perchlorate 3 mM
N.D.
N.D.
+0.2
-1.1
+0.1
stress
ALP with perchlorate 6 mM
N.D.
N.D.
+0.3
-1.1
+0.1
stress
ALP with perchlorate 12 mM
N.D.
N.D.
+0.3
-1.0
-0.0
stress
ALP with Chloride 75 mM
N.D.
N.D.
+0.3
-1.0
+0.1
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
N.D.
+0.2
-0.8
+0.1
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
N.D.
+0.3
-0.9
+0.1
carbon source
D-Lactate (C)
N.D.
N.D.
+0.3
-0.6
+0.1
carbon source
D,L-Lactate (C)
N.D.
N.D.
+0.3
-0.7
+0.2
carbon source
L-Lactate (C)
N.D.
N.D.
+0.3
-0.7
+0.1
carbon source
pyruvate (C)
N.D.
N.D.
+0.4
-0.7
+0.1
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
+0.4
-0.1
-0.4
carbon source
L-Lactate (C)
N.D.
N.D.
+0.4
-0.5
+0.2
carbon source
D-Lactate (C)
N.D.
N.D.
+0.4
-0.6
+0.1
carbon source
D,L-Lactate (C)
N.D.
N.D.
+0.4
-0.6
+0.2
carbon source
pyruvate (C)
N.D.
N.D.
+0.4
-0.6
+0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.7
-0.3
-0.1
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
+1.1
-0.6
-0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.6
-0.2
-0.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
+0.7
-0.3
-0.0
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
+0.6
-0.2
+0.1
carbon source
propionate (C)
N.D.
N.D.
+0.7
-0.4
+0.2
stress
ALP with Fusidic 0.02 mg/ml
N.D.
N.D.
+1.1
-0.7
+0.1
stress
ALP with Fusidic 0.007 mg/ml
N.D.
N.D.
+1.1
-0.7
+0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.7
-0.1
+0.0
carbon source
propionate (C)
N.D.
N.D.
+0.7
-0.2
+0.2
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
+0.4
+0.5
-0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.7
+0.1
+0.1
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
N.D.
+0.3
+0.4
+0.4
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
+0.6
+1.4
-0.2
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
+0.8
+0.9
+0.6
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