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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
3
4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3242 and Dsui_3243 are separated by 21 nucleotides
Dsui_3243 and Dsui_3244 are separated by 22 nucleotides
Dsui_3244 and Dsui_3245 are separated by 66 nucleotides
Dsui_3245 and Dsui_3246 are separated by 12 nucleotides
Dsui_3242: Dsui_3242 - hypothetical protein, at 3,485,796 to 3,486,056
_3242
Dsui_3243: Dsui_3243 - clan AA aspartic protease, TIGR02281 family, at 3,486,078 to 3,486,728
_3243
Dsui_3244: Dsui_3244 - GMP synthase family protein, at 3,486,751 to 3,487,461
_3244
Dsui_3245: Dsui_3245 - hypothetical protein, at 3,487,528 to 3,488,022
_3245
Dsui_3246: Dsui_3246 - hypothetical protein, at 3,488,035 to 3,488,349
_3246
Group
Condition
Dsui
_3242
Dsui
_3243
Dsui
_3244
Dsui
_3245
Dsui
_3246
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-0.7
+0.2
-0.0
-0.5
-0.1
stress
ALP with Cisplatin 0.0009 mg/ml
-0.2
-0.4
-0.9
-0.1
+0.3
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.0
+0.0
-1.1
+0.1
+0.3
stress
ALP with Bacitracin 0.2 mg/ml
-0.0
-0.0
-1.1
+0.2
+0.3
stress
ALP with perchlorate 12 mM
-0.4
-0.0
-0.8
+0.4
+0.3
stress
ALP with nitrite 0.15 mM
+0.1
+0.0
-1.1
+0.2
+0.2
stress
ALP with perchlorate 6 mM
-0.2
-0.1
-0.8
+0.3
+0.2
stress
ALP with Cisplatin 0.0008 mg/ml
+0.1
-0.1
-0.9
+0.1
+0.3
stress
ALP with perchlorate 3 mM
-0.1
+0.0
-0.9
+0.3
+0.2
stress
ALP with Fusidic 0.007 mg/ml
-0.3
-0.2
-1.0
+0.4
+0.6
carbon source
D-Lactate (C)
-0.2
+0.2
-0.8
+0.1
+0.2
carbon source
a-Ketoglutaric (C)
-0.4
-0.1
-0.8
+0.4
+0.5
carbon source
propionate (C)
-0.2
-0.0
-0.9
+0.2
+0.5
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.1
+0.1
-0.9
+0.2
+0.3
stress
ALP with copper (II) chloride 0.6 mM
+0.0
-0.3
-0.7
+0.3
+0.3
stress
ALP with sodium fluoride 30 mM
+0.2
+0.0
-1.0
+0.3
+0.1
stress
ALP with nitrate 50 mM
+0.2
-0.1
-0.9
+0.2
+0.2
carbon source
a-Ketoglutaric (C)
-0.4
+0.0
-0.6
+0.3
+0.4
stress
ALP with Chloride 75 mM
-0.1
+0.1
-0.7
+0.2
+0.3
stress
ALP with Zinc 2 mM
+0.2
-0.0
-1.1
+0.3
+0.5
stress
ALP with Zinc 1 mM
+0.1
+0.1
-0.9
+0.3
+0.3
carbon source
propionate (C)
-0.1
+0.0
-0.7
+0.3
+0.5
stress
ALP with nitrate 75 mM
+0.2
+0.0
-0.8
+0.3
+0.3
stress
ALP with Cisplatin 0.0007 mg/ml
+0.1
+0.0
-0.9
+0.3
+0.6
stress
ALP with Nickel (II) chloride 3.5 mM
+0.3
+0.1
-0.6
+0.3
+0.3
stress
ALP with Fusidic 0.02 mg/ml
-0.2
-0.0
-0.6
+0.4
+0.8
stress
ALP with Cobalt chloride 0.2 mM
+0.4
+0.1
-0.7
+0.4
+0.2
stress
ALP with Fusidic 0.01 mg/ml
-0.3
-0.1
-0.2
+0.4
+0.6
stress
ALP with Cobalt chloride 0.25 mM
+0.5
+0.2
-0.6
+0.5
+0.4
stress
ALP with Nickel (II) chloride 2.5 mM
+0.7
+0.6
+0.1
+0.7
+0.7
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Dsui_3244
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