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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3222 and Dsui_3223 are separated by 140 nucleotides
Dsui_3223 and Dsui_3224 are separated by 11 nucleotides
Dsui_3224 and Dsui_3225 overlap by 4 nucleotides
Dsui_3225 and Dsui_3226 are separated by 278 nucleotides
Dsui_3222: Dsui_3222 - oligoribonuclease (3'->5' exoribonuclease), at 3,460,760 to 3,461,305
_3222
Dsui_3223: Dsui_3223 - Zn-dependent protease with chaperone function, at 3,461,446 to 3,462,717
_3223
Dsui_3224: Dsui_3224 - pterin-4a-carbinolamine dehydratase, at 3,462,729 to 3,463,064
_3224
Dsui_3225: Dsui_3225 - ribosome small subunit-dependent GTPase A, at 3,463,061 to 3,463,948
_3225
Dsui_3226: Dsui_3226 - putative SAM-dependent methyltransferase, at 3,464,227 to 3,465,186
_3226
Group
Condition
Dsui
_3222
Dsui
_3223
Dsui
_3224
Dsui
_3225
Dsui
_3226
carbon source
pyruvate (C)
N.D.
-0.2
-1.6
N.D.
-1.7
stress
ALP with Cobalt chloride 0.2 mM
N.D.
-0.5
-0.8
N.D.
-1.8
carbon source
propionate (C)
N.D.
-0.2
-1.2
N.D.
-1.7
stress
ALP with Cobalt chloride 0.25 mM
N.D.
-0.7
-0.7
N.D.
-1.6
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
-0.4
-0.9
N.D.
-1.7
stress
ALP with Thallium(I) acetate 0.003 mg/ml
N.D.
-0.3
-0.9
N.D.
-1.7
stress
ALP with Chloride 75 mM
N.D.
-0.3
-0.3
N.D.
-2.4
stress
ALP with perchlorate 6 mM
N.D.
-0.0
-0.7
N.D.
-2.2
stress
ALP with nitrite 0.3 mM
N.D.
-0.6
-0.3
N.D.
-2.0
stress
ALP with perchlorate 3 mM
N.D.
-0.4
-0.0
N.D.
-2.5
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
-0.6
-0.4
N.D.
-1.8
carbon source
L-Lactate (C)
N.D.
-0.2
-0.8
N.D.
-1.7
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
-0.4
-0.6
N.D.
-1.7
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
-0.6
-0.5
N.D.
-1.6
alp richb
ALP
N.D.
-0.5
-0.8
N.D.
-1.4
stress
ALP with Zinc 1 mM
N.D.
-0.5
-0.6
N.D.
-1.5
stress
ALP with nitrite 0.15 mM
N.D.
-0.6
-0.2
N.D.
-1.8
stress
ALP with sodium fluoride 30 mM
N.D.
-0.0
-0.4
N.D.
-2.1
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
-0.4
-0.8
N.D.
-1.3
stress
rich media with sodium chlorite 0.16 mM
N.D.
-0.1
-2.5
N.D.
+0.3
stress
ALP with nitrate 50 mM
N.D.
-0.4
-0.7
N.D.
-1.2
stress
ALP with Nickel (II) chloride 1.5 mM
N.D.
-0.7
-0.7
N.D.
-0.8
stress
ALP with perchlorate 12 mM
N.D.
-0.2
+0.4
N.D.
-2.2
carbon source
D-Lactate (C)
N.D.
-0.2
-0.2
N.D.
-1.7
carbon source
D,L-Lactate (C)
N.D.
-0.4
+0.1
N.D.
-1.7
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.1
-1.5
N.D.
-0.5
stress
ALP with sodium fluoride 40 mM
N.D.
-0.4
+0.2
N.D.
-1.6
carbon source
pyruvate (C)
N.D.
-0.4
+0.4
N.D.
-1.5
carbon source
defined media with 40 mM sodium acetate
N.D.
+0.2
-1.8
N.D.
+0.2
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
+0.1
+1.0
N.D.
-1.3
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Dsui_3224
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