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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3213 and Dsui_3214 are separated by 125 nucleotides
Dsui_3214 and Dsui_3215 overlap by 8 nucleotides
Dsui_3215 and Dsui_3216 are separated by 15 nucleotides
Dsui_3216 and Dsui_3217 are separated by 230 nucleotides
Dsui_3213: Dsui_3213 - CBS domain-containing protein, at 3,448,687 to 3,449,136
_3213
Dsui_3214: Dsui_3214 - ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing, at 3,449,262 to 3,452,603
_3214
Dsui_3215: Dsui_3215 - Inactivated superfamily I helicase, at 3,452,596 to 3,455,388
_3215
Dsui_3216: Dsui_3216 - ferredoxin, at 3,455,404 to 3,455,727
_3216
Dsui_3217: Dsui_3217 - thioredoxin, at 3,455,958 to 3,456,284
_3217
Group
Condition
Dsui
_3213
Dsui
_3214
Dsui
_3215
Dsui
_3216
Dsui
_3217
carbon source
D,L-Lactate (C)
-1.5
N.D.
N.D.
N.D.
N.D.
carbon source
pyruvate (C)
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
pyruvate (C)
-1.0
N.D.
N.D.
N.D.
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
-1.0
N.D.
N.D.
N.D.
N.D.
stress
ALP with sodium fluoride 30 mM
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Lactate (C)
-0.9
N.D.
N.D.
N.D.
N.D.
stress
ALP with sodium fluoride 40 mM
-0.8
N.D.
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-0.7
N.D.
N.D.
N.D.
N.D.
carbon source
L-Lactate (C)
-0.7
N.D.
N.D.
N.D.
N.D.
carbon source
defined media with 30 mM sodium lactate
-0.7
N.D.
N.D.
N.D.
N.D.
carbon source
defined media with 40 mM sodium acetate
+0.7
N.D.
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
N.D.
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
N.D.
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
N.D.
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.8
N.D.
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.9
N.D.
N.D.
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.9
N.D.
N.D.
N.D.
N.D.
stress
ALP with Fusidic 0.02 mg/ml
+1.0
N.D.
N.D.
N.D.
N.D.
stress
ALP with Fusidic 0.007 mg/ml
+1.0
N.D.
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+1.1
N.D.
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+1.1
N.D.
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+1.1
N.D.
N.D.
N.D.
N.D.
stress
ALP with Fusidic 0.01 mg/ml
+1.2
N.D.
N.D.
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+1.2
N.D.
N.D.
N.D.
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+1.2
N.D.
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+1.2
N.D.
N.D.
N.D.
N.D.
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