Fitness for 5 genes in Dechlorosoma suillum PS

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 104 experiments or choose conditions or try the comparative fitness browser

500 ntDsui_3194 and Dsui_3195 overlap by 4 nucleotidesDsui_3195 and Dsui_3196 are separated by 130 nucleotidesDsui_3196 and Dsui_3197 are separated by 215 nucleotidesDsui_3197 and Dsui_3198 are separated by 93 nucleotides Dsui_3194: Dsui_3194 - pseudouridylate synthase I, at 3,428,225 to 3,429,052 _3194 Dsui_3195: Dsui_3195 - Cobalt transport protein, at 3,429,049 to 3,429,678 _3195 Dsui_3196: Dsui_3196 - FimV N-terminal domain protein, at 3,429,809 to 3,432,817 _3196 Dsui_3197: Dsui_3197 - aspartate-semialdehyde dehydrogenase, gamma-proteobacterial, at 3,433,033 to 3,434,166 _3197 Dsui_3198: Dsui_3198 - 3-isopropylmalate dehydrogenase, at 3,434,260 to 3,435,324 _3198
Group Condition Dsui_3194 Dsui_3195 Dsui_3196 Dsui_3197 Dsui_3198
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours -4.6 N.D. +0.2 N.D. N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours -4.3 N.D. +0.1 N.D. N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate -3.5 N.D. +0.0 N.D. N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate -3.4 N.D. +0.1 N.D. N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate -3.2 N.D. -0.1 N.D. N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate -3.2 N.D. -0.1 N.D. N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate -3.1 N.D. -0.2 N.D. N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate -3.1 N.D. -0.1 N.D. N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate -3.2 N.D. +0.0 N.D. N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate -2.9 N.D. -0.1 N.D. N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate -2.8 N.D. +0.0 N.D. N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate -2.8 N.D. +0.1 N.D. N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate -2.7 N.D. +0.1 N.D. N.D.
anaerobic anaerobic ALP with 3 all (C)s and 5mM perchlorate -1.7 N.D. -0.8 N.D. N.D.
anaerobic anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate -0.8 N.D. -0.6 N.D. N.D.
alp rich rich media -1.1 N.D. -0.0 N.D. N.D.
carbon source R2A with sodium pyruvate -0.7 N.D. -0.3 N.D. N.D.
anaerobic Anaero. lactate (C), perchlorate electron acceptor -0.2 N.D. -0.8 N.D. N.D.
stress ALP with copper (II) chloride 0.6 mM -1.8 N.D. +1.0 N.D. N.D.
carbon source defined media with 30 mM sodium lactate -0.8 N.D. +0.1 N.D. N.D.
carbon source L-Lactate (C) -0.9 N.D. +0.2 N.D. N.D.
carbon source defined media with 40 mM sodium acetate -0.7 N.D. +0.1 N.D. N.D.
carbon source D,L-Lactate (C) -0.8 N.D. +0.3 N.D. N.D.
carbon source propionate (C) -0.7 N.D. +0.5 N.D. N.D.
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -0.6 N.D. +0.4 N.D. N.D.
stress ALP with Nickel (II) chloride 2.5 mM +0.6 N.D. +0.3 N.D. N.D.
stress ALP with Cobalt chloride 0.25 mM +1.8 N.D. +0.2 N.D. N.D.
stress ALP with Fusidic 0.02 mg/ml +2.7 N.D. +1.1 N.D. N.D.
stress ALP with Fusidic 0.007 mg/ml +2.9 N.D. +1.0 N.D. N.D.
stress ALP with Fusidic 0.01 mg/ml +2.9 N.D. +1.2 N.D. N.D.
remove
Dsui_3194
plot		 remove
Dsui_3195
plot		 remove
Dsui_3196		 remove
Dsui_3197
plot		 remove
Dsui_3198
plot