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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3176 and Dsui_3177 overlap by 4 nucleotides
Dsui_3177 and Dsui_3178 overlap by 10 nucleotides
Dsui_3178 and Dsui_3179 are separated by 16 nucleotides
Dsui_3179 and Dsui_3180 overlap by 1 nucleotides
Dsui_3176: Dsui_3176 - RND family efflux transporter, MFP subunit, at 3,406,898 to 3,408,184
_3176
Dsui_3177: Dsui_3177 - ABC-type antimicrobial peptide transport system, ATPase component, at 3,408,181 to 3,408,909
_3177
Dsui_3178: Dsui_3178 - ABC-type antimicrobial peptide transport system, permease component, at 3,408,900 to 3,410,111
_3178
Dsui_3179: Dsui_3179 - signal transduction histidine kinase, at 3,410,128 to 3,411,192
_3179
Dsui_3180: Dsui_3180 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 3,411,192 to 3,411,902
_3180
Group
Condition
Dsui
_3176
Dsui
_3177
Dsui
_3178
Dsui
_3179
Dsui
_3180
stress
ALP with nitrate 50 mM
N.D.
N.D.
-2.1
-2.7
-1.2
stress
ALP with nitrite 0.3 mM
N.D.
N.D.
-2.0
-2.7
-1.2
stress
ALP with nitrite 0.15 mM
N.D.
N.D.
-2.0
-2.7
-1.2
alp richb
ALP
N.D.
N.D.
-2.0
-2.6
-1.1
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
N.D.
-2.1
-1.8
-1.3
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
N.D.
-1.7
-2.4
-0.9
stress
ALP with nitrite 0.45 mM
N.D.
N.D.
-2.0
-1.8
-1.2
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
N.D.
-1.7
-2.4
-0.9
stress
ALP with sodium fluoride 30 mM
N.D.
N.D.
-1.8
-2.4
-0.7
stress
ALP with Zinc 2 mM
N.D.
N.D.
-1.8
-2.5
-0.6
stress
ALP with Zinc 1 mM
N.D.
N.D.
-1.9
-2.0
-1.1
stress
ALP with Thallium(I) acetate 0.003 mg/ml
N.D.
N.D.
-2.0
-1.6
-1.2
stress
ALP with nitrate 75 mM
N.D.
N.D.
-1.9
-1.7
-1.1
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
N.D.
-1.8
-1.5
-1.3
stress
ALP with sodium fluoride 40 mM
N.D.
N.D.
-1.9
-1.6
-1.1
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
N.D.
-1.2
-2.3
-0.8
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
-1.6
-1.8
-1.0
stress
ALP with perchlorate 6 mM
N.D.
N.D.
-2.5
-1.7
-0.2
stress
ALP with Chloride 75 mM
N.D.
N.D.
-2.4
-1.9
+0.1
stress
ALP with perchlorate 3 mM
N.D.
N.D.
-2.2
-2.0
-0.0
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
-1.7
-1.4
-0.9
stress
ALP with Nickel (II) chloride 1.5 mM
N.D.
N.D.
-1.6
-1.6
-0.8
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
N.D.
-2.1
-1.6
+0.2
stress
ALP with Fusidic 0.007 mg/ml
N.D.
N.D.
-2.1
-1.6
+0.2
carbon source
pyruvate (C)
N.D.
N.D.
-2.1
-1.5
+0.3
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
N.D.
-1.9
-1.8
+0.4
carbon source
D,L-Lactate (C)
N.D.
N.D.
-2.1
-1.5
+0.3
carbon source
propionate (C)
N.D.
N.D.
-1.9
-1.3
+0.5
carbon source
L-Lactate (C)
N.D.
N.D.
-1.6
-1.4
+0.4
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
-1.7
-1.1
+0.7
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