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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3084 and Dsui_3085 are separated by 274 nucleotides
Dsui_3085 and Dsui_3086 overlap by 1 nucleotides
Dsui_3086 and Dsui_3087 overlap by 1 nucleotides
Dsui_3087 and Dsui_3088 are separated by 110 nucleotides
Dsui_3084: Dsui_3084 - cysteinyl-tRNA synthetase, at 3,302,052 to 3,303,482
_3084
Dsui_3085: Dsui_3085 - tetratricopeptide repeat protein, at 3,303,757 to 3,304,920
_3085
Dsui_3086: Dsui_3086 - hypothetical protein, at 3,304,920 to 3,306,221
_3086
Dsui_3087: Dsui_3087 - peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 3,306,221 to 3,306,796
_3087
Dsui_3088: Dsui_3088 - peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 3,306,907 to 3,307,398
_3088
Group
Condition
Dsui
_3084
Dsui
_3085
Dsui
_3086
Dsui
_3087
Dsui
_3088
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
-0.5
-0.5
-0.2
-1.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-1.0
-0.1
-0.1
-1.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
-0.1
-0.1
-1.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
+0.0
-0.0
-1.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
-0.0
-0.0
-1.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
-0.1
-0.0
-1.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
-0.0
+0.1
-1.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
-0.1
+0.1
-1.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
-0.1
+0.1
-1.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-0.9
-0.0
+0.1
-1.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
-0.1
+0.1
-1.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-0.8
-0.4
-0.0
-0.5
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
-0.4
-0.5
-0.2
-0.8
stress
ALP with Nickel (II) chloride 1.5 mM
N.D.
-0.5
-0.6
-0.2
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.4
-0.0
-0.1
-0.8
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-0.3
-0.0
-0.2
-0.9
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-0.4
-0.4
+0.2
-0.8
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-0.5
-0.1
+0.0
-0.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-0.8
-0.4
-0.0
+0.0
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.5
+0.1
+0.0
-0.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-0.8
-0.2
+0.2
-0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
-0.0
+0.2
-0.3
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
-0.3
+0.1
-0.3
-0.5
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
-0.3
+0.1
-0.2
-0.6
stress
ALP with Fusidic 0.01 mg/ml
N.D.
-0.6
+0.3
-0.4
+0.0
stress
ALP with Fusidic 0.02 mg/ml
N.D.
-0.4
+0.3
-0.1
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
+0.4
+0.1
+0.1
-0.8
stress
ALP with copper (II) chloride 0.6 mM
N.D.
+0.2
-0.3
+0.2
+0.4
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
-0.0
-0.2
+0.4
+0.6
stress
rich media with sodium chlorite 0.16 mM
N.D.
+0.1
+0.3
+0.6
-0.2
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