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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3072 and Dsui_3073 are separated by 3 nucleotides
Dsui_3073 and Dsui_3074 are separated by 128 nucleotides
Dsui_3074 and Dsui_3075 overlap by 1 nucleotides
Dsui_3075 and Dsui_3076 are separated by 61 nucleotides
Dsui_3072: Dsui_3072 - DNA repair protein RecN, at 3,287,070 to 3,288,725
_3072
Dsui_3073: Dsui_3073 - putative sugar kinase, at 3,288,729 to 3,289,607
_3073
Dsui_3074: Dsui_3074 - heat shock gene repressor HrcA, at 3,289,736 to 3,290,764
_3074
Dsui_3075: Dsui_3075 - ferrochelatase, at 3,290,764 to 3,291,867
_3075
Dsui_3076: Dsui_3076 - thioredoxin, at 3,291,929 to 3,292,372
_3076
Group
Condition
Dsui
_3072
Dsui
_3073
Dsui
_3074
Dsui
_3075
Dsui
_3076
stress
ALP with Cisplatin 0.0009 mg/ml
-7.0
N.D.
+0.0
N.D.
-0.1
stress
ALP with Cisplatin 0.0007 mg/ml
-5.7
N.D.
+0.3
N.D.
-0.4
stress
ALP with Cisplatin 0.0008 mg/ml
-5.0
N.D.
+0.1
N.D.
-0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.1
N.D.
-0.7
N.D.
-0.4
stress
ALP with copper (II) chloride 0.6 mM
-0.2
N.D.
-0.3
N.D.
-1.6
carbon source
defined media with 30 mM sodium lactate
-1.4
N.D.
-0.3
N.D.
-0.0
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.4
N.D.
-1.2
N.D.
+0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.0
N.D.
-0.6
N.D.
+0.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.0
N.D.
-0.6
N.D.
+0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.7
N.D.
-0.6
N.D.
-0.0
stress
ALP with nitrite 0.15 mM
-0.5
N.D.
-0.2
N.D.
-0.5
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.6
N.D.
-0.8
N.D.
+0.1
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.3
N.D.
-0.1
N.D.
-0.8
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.6
N.D.
-0.6
N.D.
-0.1
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.8
N.D.
-0.6
N.D.
+0.2
stress
ALP with Chloride 75 mM
+0.0
N.D.
-0.2
N.D.
-0.9
carbon source
D,L-Lactate (C)
+0.1
N.D.
-0.1
N.D.
-1.1
carbon source
R2A with sodium pyruvate
-1.4
N.D.
-0.1
N.D.
+0.4
carbon source
L-Lactate (C)
+0.1
N.D.
-0.2
N.D.
-0.9
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.6
N.D.
-0.6
N.D.
+0.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.0
N.D.
-0.4
N.D.
+0.5
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.6
N.D.
-0.3
N.D.
+0.3
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-0.1
N.D.
-0.8
N.D.
+0.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
N.D.
+0.5
N.D.
+0.1
carbon source
R2A with sodium pyruvate
-0.7
N.D.
-0.1
N.D.
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.6
N.D.
+0.5
N.D.
+0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
N.D.
+0.5
N.D.
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.9
N.D.
+1.1
N.D.
+0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.4
N.D.
+0.7
N.D.
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.4
N.D.
+1.0
N.D.
+0.2
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