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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_3057 and Dsui_3058 are separated by 24 nucleotides
Dsui_3058 and Dsui_3059 are separated by 79 nucleotides
Dsui_3059 and Dsui_3060 are separated by 91 nucleotides
Dsui_3060 and Dsui_3061 are separated by 35 nucleotides
Dsui_3057: Dsui_3057 - phosphoglucosamine mutase, at 3,271,779 to 3,273,134
_3057
Dsui_3058: Dsui_3058 - dihydropteroate synthase, at 3,273,159 to 3,273,983
_3058
Dsui_3059: Dsui_3059 - ATP-dependent metalloprotease FtsH, at 3,274,063 to 3,275,946
_3059
Dsui_3060: Dsui_3060 - 23S rRNA methylase, at 3,276,038 to 3,276,670
_3060
Dsui_3061: Dsui_3061 - putative RNA-binding protein, YhbY family, at 3,276,706 to 3,277,062
_3061
Group
Condition
Dsui
_3057
Dsui
_3058
Dsui
_3059
Dsui
_3060
Dsui
_3061
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
-0.6
-0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.3
-0.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.5
-0.5
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
N.D.
-0.5
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.3
-0.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.4
-0.5
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.5
-0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.5
-0.4
carbon source
defined media with 30 mM sodium lactate
N.D.
N.D.
N.D.
-0.0
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.5
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.2
-0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.3
-0.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.5
-0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.3
-0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.4
-0.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.6
-0.2
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
N.D.
-0.6
-0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.2
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.4
-0.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.3
-0.3
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
N.D.
N.D.
-0.3
-0.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.2
-0.3
stress
ALP with perchlorate 3 mM
N.D.
N.D.
N.D.
-0.3
-0.2
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
-0.4
+0.2
stress
ALP with Fusidic 0.02 mg/ml
N.D.
N.D.
N.D.
-0.5
+0.6
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
N.D.
-0.3
+0.5
stress
ALP with Fusidic 0.007 mg/ml
N.D.
N.D.
N.D.
-0.4
+1.1
anaerobic
Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5
N.D.
N.D.
N.D.
+0.2
+0.5
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
N.D.
N.D.
+0.4
+0.4
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
N.D.
N.D.
+0.4
+0.5
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