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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2973 and Dsui_2974 are separated by 4 nucleotides
Dsui_2974 and Dsui_2975 are separated by 9 nucleotides
Dsui_2975 and Dsui_2976 are separated by 164 nucleotides
Dsui_2976 and Dsui_2977 overlap by 4 nucleotides
Dsui_2973: Dsui_2973 - putative arginyl-tRNA:protein arginylyltransferase, at 3,178,389 to 3,179,162
_2973
Dsui_2974: Dsui_2974 - putative iron-regulated membrane protein, at 3,179,167 to 3,180,438
_2974
Dsui_2975: Dsui_2975 - TonB-dependent siderophore receptor, at 3,180,448 to 3,182,874
_2975
Dsui_2976: Dsui_2976 - Fe2+-dicitrate sensor, membrane component, at 3,183,039 to 3,184,058
_2976
Dsui_2977: Dsui_2977 - RNA polymerase sigma factor, sigma-70 family, at 3,184,055 to 3,184,567
_2977
Group
Condition
Dsui
_2973
Dsui
_2974
Dsui
_2975
Dsui
_2976
Dsui
_2977
stress
ALP with perchlorate 6 mM
+0.1
-1.7
-2.4
+0.1
-0.1
stress
ALP with perchlorate 3 mM
+0.1
-1.7
-2.4
-0.1
+0.1
stress
ALP with Bacitracin 0.2 mg/ml
-0.6
-1.5
-2.1
+0.0
+0.3
stress
ALP with perchlorate 12 mM
-0.4
-1.6
-2.2
+0.1
+0.3
stress
ALP with Chloride 75 mM
+0.3
-1.6
-2.2
+0.1
+0.0
carbon source
a-Ketoglutaric (C)
-0.3
-0.9
-1.6
-0.0
-0.3
carbon source
D,L-Lactate (C)
+0.0
-1.2
-1.8
+0.0
-0.1
carbon source
L-Lactate (C)
-0.1
-1.1
-1.8
+0.2
-0.2
carbon source
pyruvate (C)
-0.1
-1.3
-1.9
+0.0
+0.3
carbon source
L-Lactate (C)
-0.0
-1.2
-1.8
+0.1
+0.1
carbon source
D-Lactate (C)
+0.1
-1.2
-1.8
+0.2
-0.1
stress
ALP with Fusidic 0.007 mg/ml
+0.4
-1.3
-1.8
-0.1
+0.1
carbon source
D,L-Lactate (C)
+0.0
-1.2
-1.8
-0.0
+0.2
stress
ALP with Dimethyl Sulfoxide 2 vol%
+0.0
-1.3
-1.7
+0.1
+0.2
carbon source
D-Lactate (C)
-0.2
-1.2
-1.7
+0.2
+0.2
stress
ALP with Fusidic 0.01 mg/ml
+0.4
-1.2
-1.9
+0.1
-0.0
carbon source
pyruvate (C)
-0.1
-1.0
-1.8
-0.0
+0.3
stress
ALP with nitrate 50 mM
-0.1
-1.4
-1.3
-0.0
+0.2
carbon source
propionate (C)
-0.0
-1.0
-1.7
+0.3
+0.1
stress
ALP with sodium fluoride 30 mM
-0.2
-1.2
-1.2
-0.1
+0.3
stress
ALP with Fusidic 0.02 mg/ml
+0.3
-0.7
-1.9
-0.0
+0.2
stress
ALP with nitrate 75 mM
+0.1
-1.3
-1.3
+0.2
+0.0
stress
ALP with nitrite 0.3 mM
-0.0
-1.3
-1.3
+0.2
+0.2
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.2
-1.3
-1.3
+0.1
+0.2
stress
ALP with sodium fluoride 40 mM
+0.1
-1.3
-1.2
+0.3
+0.2
alp richb
ALP
+0.2
-1.3
-1.2
-0.1
+0.5
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.2
-1.4
-1.2
+0.2
+0.5
stress
ALP with nitrite 0.45 mM
+0.1
-1.3
-1.3
+0.4
+0.5
stress
ALP with nitrite 0.15 mM
+0.2
-1.3
-1.1
+0.3
+0.3
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+0.7
-1.3
-1.3
+0.4
+0.1
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