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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2948 and Dsui_2949 overlap by 1 nucleotides
Dsui_2949 and Dsui_2950 are separated by 132 nucleotides
Dsui_2950 and Dsui_2951 are separated by 2 nucleotides
Dsui_2951 and Dsui_2952 overlap by 4 nucleotides
Dsui_2948: Dsui_2948 - RNA polymerase sigma factor, sigma-70 family, at 3,154,650 to 3,155,147
_2948
Dsui_2949: Dsui_2949 - Fe2+-dicitrate sensor, membrane component, at 3,155,147 to 3,156,166
_2949
Dsui_2950: Dsui_2950 - TonB-dependent siderophore receptor, at 3,156,299 to 3,158,701
_2950
Dsui_2951: Dsui_2951 - putative iron-regulated membrane protein, at 3,158,704 to 3,159,981
_2951
Dsui_2952: Dsui_2952 - outer membrane porin, OprD family, at 3,159,978 to 3,161,300
_2952
Group
Condition
Dsui
_2948
Dsui
_2949
Dsui
_2950
Dsui
_2951
Dsui
_2952
stress
ALP with Zinc 1 mM
-0.4
-2.3
-1.1
-1.0
-1.6
stress
ALP with perchlorate 6 mM
-0.3
-0.3
-1.4
-2.2
-2.0
stress
ALP with perchlorate 3 mM
-0.3
-0.4
-1.4
-2.0
-1.6
stress
ALP with nitrite 0.3 mM
-0.9
-1.1
-1.3
-1.4
-0.9
stress
ALP with nitrate 75 mM
-0.2
-1.8
-1.2
-1.3
-1.1
stress
ALP with Chloride 75 mM
-0.5
-0.5
-1.3
-2.0
-1.1
stress
ALP with Zinc 2 mM
-0.8
-1.4
-1.0
-1.1
-0.9
stress
ALP with sodium fluoride 30 mM
-0.7
-1.2
-1.1
-1.0
-1.0
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.3
-0.7
-0.8
-1.8
-1.3
carbon source
a-Ketoglutaric (C)
-1.3
-0.3
-0.7
-1.4
-1.1
stress
ALP with sodium fluoride 40 mM
-0.9
-0.7
-1.1
-1.3
-0.9
stress
ALP with Bacitracin 0.2 mg/ml
-0.1
-1.0
-1.2
-1.2
-1.3
carbon source
L-Lactate (C)
-0.3
-1.5
-0.9
-1.2
-0.8
stress
ALP with perchlorate 12 mM
+0.3
-0.5
-1.1
-2.0
-1.3
carbon source
a-Ketoglutaric (C)
-1.5
+0.1
-0.6
-1.4
-1.1
stress
ALP with nitrite 0.45 mM
-0.7
-0.5
-1.2
-1.1
-1.0
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.1
-1.3
-1.2
-1.3
-0.8
carbon source
pyruvate (C)
-0.1
-0.9
-0.9
-1.7
-0.9
carbon source
pyruvate (C)
-0.3
-0.9
-0.8
-1.6
-0.9
stress
ALP with Nickel (II) chloride 1.5 mM
-1.8
-0.4
-0.7
-0.8
-0.7
carbon source
D,L-Lactate (C)
+0.0
-1.3
-0.9
-1.6
-0.4
carbon source
L-Lactate (C)
-0.6
+0.0
-0.8
-1.6
-1.1
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+0.2
-1.1
-1.1
-1.3
-0.8
stress
ALP with Nickel (II) chloride 3.5 mM
-0.4
-0.7
-0.9
-1.0
-1.1
alp richb
ALP
+0.2
-1.0
-1.1
-1.3
-1.0
stress
ALP with nitrite 0.15 mM
+0.1
-0.8
-1.1
-1.1
-1.0
stress
ALP with nitrate 50 mM
+0.5
-1.2
-1.1
-1.4
-0.8
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.3
-0.1
-1.2
-1.3
-1.6
carbon source
propionate (C)
-0.8
+0.4
-0.8
-1.5
-1.1
carbon source
propionate (C)
+0.1
-1.0
-0.6
-1.3
-1.0
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