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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2905 and Dsui_2906 are separated by 64 nucleotides
Dsui_2906 and Dsui_2907 are separated by 252 nucleotides
Dsui_2907 and Dsui_2908 are separated by 55 nucleotides
Dsui_2908 and Dsui_2909 are separated by 67 nucleotides
Dsui_2905: Dsui_2905 - flagellin/flagellar hook associated protein, at 3,108,210 to 3,109,388
_2905
Dsui_2906: Dsui_2906 - Uncharacterized conserved protein (DUF2249), at 3,109,453 to 3,109,710
_2906
Dsui_2907: Dsui_2907 - homoserine dehydrogenase, at 3,109,963 to 3,111,273
_2907
Dsui_2908: Dsui_2908 - aspartate/tyrosine/aromatic aminotransferase, at 3,111,329 to 3,112,555
_2908
Dsui_2909: Dsui_2909 - aspartate/tyrosine/aromatic aminotransferase, at 3,112,623 to 3,113,810
_2909
Group
Condition
Dsui
_2905
Dsui
_2906
Dsui
_2907
Dsui
_2908
Dsui
_2909
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
N.D.
N.D.
-1.8
-0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
N.D.
N.D.
-1.6
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.5
N.D.
N.D.
-1.4
+0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.3
N.D.
N.D.
-1.0
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.5
N.D.
N.D.
-1.1
-0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.4
N.D.
N.D.
-1.1
-0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
N.D.
N.D.
-1.4
+0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.5
N.D.
N.D.
-1.0
-0.1
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.0
N.D.
N.D.
-1.9
-0.6
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.2
N.D.
N.D.
-1.0
-0.3
carbon source
defined media with 40 mM sodium acetate
-0.7
N.D.
N.D.
-1.7
-0.0
stress
ALP with Cobalt chloride 0.25 mM
-0.7
N.D.
N.D.
-1.6
+0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.4
N.D.
N.D.
-1.0
+0.1
stress
ALP with Nickel (II) chloride 3.5 mM
-0.8
N.D.
N.D.
-1.5
+0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
N.D.
N.D.
-0.9
+0.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.4
N.D.
N.D.
-1.2
-0.4
carbon source
defined media with 40 mM sodium acetate
-0.1
N.D.
N.D.
-1.7
-0.1
carbon source
R2A with sodium pyruvate
-1.1
N.D.
N.D.
-0.7
-0.1
stress
ALP with Nickel (II) chloride 2.5 mM
-0.1
N.D.
N.D.
-2.4
+0.7
alp richb
ALP
-1.0
N.D.
N.D.
-0.9
+0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
N.D.
N.D.
-0.6
+0.2
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.2
N.D.
N.D.
-1.0
-0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.3
N.D.
N.D.
-1.1
-0.4
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.3
N.D.
N.D.
-0.3
+0.3
stress
ALP with nitrite 0.15 mM
-1.2
N.D.
N.D.
-0.3
+0.3
stress
ALP with Zinc 1 mM
-1.1
N.D.
N.D.
-0.4
+0.4
stress
ALP with nitrate 50 mM
-1.2
N.D.
N.D.
-0.1
+0.5
stress
ALP with Fusidic 0.007 mg/ml
+0.2
N.D.
N.D.
+3.3
+0.2
stress
ALP with Fusidic 0.01 mg/ml
+0.3
N.D.
N.D.
+3.1
+0.3
stress
ALP with Fusidic 0.02 mg/ml
+0.2
N.D.
N.D.
+3.3
+0.2
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