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Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2899 and Dsui_2900 overlap by 4 nucleotides
Dsui_2900 and Dsui_2901 are separated by 62 nucleotides
Dsui_2901 and Dsui_2902 are separated by 224 nucleotides
Dsui_2902 and Dsui_2903 are separated by 31 nucleotides
Dsui_2899: Dsui_2899 - putative permease, DMT superfamily, at 3,102,156 to 3,103,034
_2899
Dsui_2900: Dsui_2900 - glutamate synthase family protein, at 3,103,031 to 3,104,515
_2900
Dsui_2901: Dsui_2901 - nicotinate-nucleotide pyrophosphorylase, at 3,104,578 to 3,105,462
_2901
Dsui_2902: Dsui_2902 - hypothetical protein, at 3,105,687 to 3,105,824
_2902
Dsui_2903: Dsui_2903 - methyltransferase family protein, at 3,105,856 to 3,106,476
_2903
Group
Condition
Dsui
_2899
Dsui
_2900
Dsui
_2901
Dsui
_2902
Dsui
_2903
stress
ALP with Bacitracin 0.2 mg/ml
-0.0
-0.6
N.D.
+0.1
-2.5
carbon source
R2A with sodium pyruvate
-0.2
-0.4
N.D.
-2.0
-0.2
carbon source
a-Ketoglutaric (C)
+0.0
-0.4
N.D.
-0.2
-2.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
-0.4
N.D.
-1.7
-0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.2
-0.2
N.D.
-2.3
-0.1
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.0
-0.5
N.D.
-0.1
-2.1
stress
ALP with Zinc 2 mM
-0.6
-0.7
N.D.
+0.5
-1.8
carbon source
R2A with sodium pyruvate
+0.2
-0.3
N.D.
-2.4
+0.0
stress
ALP with Fusidic 0.01 mg/ml
-0.4
-0.5
N.D.
-0.2
-1.4
stress
ALP with Chloride 75 mM
+0.1
-0.6
N.D.
+0.1
-2.0
stress
ALP with perchlorate 3 mM
+0.0
-0.8
N.D.
+0.5
-2.0
carbon source
D-Lactate (C)
+0.1
-0.4
N.D.
+0.1
-1.8
carbon source
a-Ketoglutaric (C)
-0.2
-0.5
N.D.
+0.5
-1.8
carbon source
D-Lactate (C)
-0.1
-0.4
N.D.
+0.5
-1.9
carbon source
D,L-Lactate (C)
+0.3
+0.1
N.D.
+0.6
-2.8
stress
ALP with perchlorate 6 mM
+0.2
-0.8
N.D.
+0.4
-1.4
stress
ALP with Cobalt chloride 0.2 mM
-0.3
-0.8
N.D.
+0.7
-0.8
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.3
-0.2
N.D.
+2.1
-0.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
-0.4
N.D.
+2.7
-0.6
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.0
-0.2
N.D.
+2.2
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.0
-0.2
N.D.
+2.2
-0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.0
-0.2
N.D.
+2.3
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
-0.5
N.D.
+2.7
-0.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
-0.4
N.D.
+2.4
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
-0.4
N.D.
+2.7
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
-0.4
N.D.
+2.9
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
-0.4
N.D.
+2.7
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.0
-0.0
N.D.
+2.7
-0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.0
-0.5
N.D.
+3.2
-0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
-0.1
N.D.
+2.8
-0.2
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