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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2867 and Dsui_2868 are separated by 46 nucleotides
Dsui_2868 and Dsui_2869 overlap by 17 nucleotides
Dsui_2869 and Dsui_2870 are separated by 99 nucleotides
Dsui_2870 and Dsui_2871 are separated by 69 nucleotides
Dsui_2867: Dsui_2867 - surface antigen family protein, at 3,061,146 to 3,061,844
_2867
Dsui_2868: Dsui_2868 - tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein, at 3,061,891 to 3,063,858
_2868
Dsui_2869: Dsui_2869 - transcriptional regulator, at 3,063,842 to 3,064,813
_2869
Dsui_2870: Dsui_2870 - putative permease, at 3,064,913 to 3,065,839
_2870
Dsui_2871: Dsui_2871 - FHA domain-containing protein, at 3,065,909 to 3,066,799
_2871
Group
Condition
Dsui
_2867
Dsui
_2868
Dsui
_2869
Dsui
_2870
Dsui
_2871
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.6
-0.5
-3.3
-5.5
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.7
-0.3
-3.0
-5.5
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.5
-0.6
-2.6
-5.1
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.5
-0.2
-2.5
-5.6
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
-0.0
-2.8
-5.5
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.5
-0.1
-3.0
-5.0
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.6
-0.1
-2.9
-4.8
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.0
-0.1
-3.3
-4.0
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.6
+0.0
-2.7
-5.0
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.2
-0.1
-2.7
-4.7
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
-0.4
-2.3
-4.2
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
-0.0
-2.7
-3.6
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.7
-0.0
-2.7
-3.4
N.D.
carbon source
propionate (C)
-0.7
-1.0
-1.3
-2.5
N.D.
carbon source
propionate (C)
-0.9
-0.2
-1.7
-2.6
N.D.
stress
ALP with perchlorate 6 mM
-1.6
-1.7
-0.1
-0.4
N.D.
stress
ALP with Fusidic 0.02 mg/ml
-1.2
-1.5
+0.2
-1.2
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.0
-2.3
-0.8
-0.2
N.D.
stress
ALP with perchlorate 3 mM
-1.6
-0.9
+0.3
-0.8
N.D.
stress
ALP with nitrate 50 mM
-0.8
-1.9
+0.1
-0.2
N.D.
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.2
-0.7
+0.2
-1.1
N.D.
stress
ALP with Bacitracin 0.2 mg/ml
-1.3
-1.2
+0.2
-0.4
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.3
-0.3
+0.2
-1.2
N.D.
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.8
-1.5
+0.2
-0.5
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.9
-1.6
+0.3
-0.5
N.D.
stress
ALP with Fusidic 0.007 mg/ml
-1.3
-0.5
+0.2
-1.0
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
-0.4
-1.6
+0.4
-1.0
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.8
+0.3
-0.8
-0.2
N.D.
stress
ALP with Cobalt chloride 0.25 mM
-0.5
-2.1
+0.2
+0.3
N.D.
carbon source
D,L-Lactate (C)
-1.0
+0.5
-0.2
-1.2
N.D.
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