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Gene
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Cofit
Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2860 and Dsui_2861 are separated by 125 nucleotides
Dsui_2861 and Dsui_2862 are separated by 130 nucleotides
Dsui_2862 and Dsui_2863 are separated by 26 nucleotides
Dsui_2863 and Dsui_2864 are separated by 123 nucleotides
Dsui_2860: Dsui_2860 - single-stranded-DNA-specific exonuclease RecJ, at 3,049,991 to 3,051,688
_2860
Dsui_2861: Dsui_2861 - DMT(drug/metabolite transporter) superfamily permease, at 3,051,814 to 3,052,710
_2861
Dsui_2862: Dsui_2862 - peptide chain release factor 2, at 3,052,841 to 3,053,945
_2862
Dsui_2863: Dsui_2863 - lysyl-tRNA synthetase (class II), at 3,053,972 to 3,055,474
_2863
Dsui_2864: Dsui_2864 - signal transduction histidine kinase, at 3,055,598 to 3,058,393
_2864
Group
Condition
Dsui
_2860
Dsui
_2861
Dsui
_2862
Dsui
_2863
Dsui
_2864
stress
ALP with Zinc 2 mM
N.D.
-1.2
N.D.
N.D.
-1.2
carbon source
D-Lactate (C)
N.D.
-0.6
N.D.
N.D.
-0.9
stress
ALP with perchlorate 3 mM
N.D.
-0.3
N.D.
N.D.
-1.3
stress
ALP with nitrate 50 mM
N.D.
-0.6
N.D.
N.D.
-1.0
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
-0.3
N.D.
N.D.
-1.3
stress
ALP with perchlorate 6 mM
N.D.
-0.2
N.D.
N.D.
-1.2
carbon source
D,L-Lactate (C)
N.D.
-0.4
N.D.
N.D.
-1.0
carbon source
L-Lactate (C)
N.D.
-0.4
N.D.
N.D.
-1.0
stress
ALP with nitrite 0.45 mM
N.D.
-0.6
N.D.
N.D.
-0.8
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
-0.7
N.D.
N.D.
-0.6
stress
ALP with Zinc 1 mM
N.D.
-0.6
N.D.
N.D.
-0.7
stress
ALP with Cobalt chloride 0.25 mM
N.D.
-0.6
N.D.
N.D.
-0.7
carbon source
propionate (C)
N.D.
-0.4
N.D.
N.D.
-0.9
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
-0.4
N.D.
N.D.
-0.8
stress
ALP with Chloride 75 mM
N.D.
-0.3
N.D.
N.D.
-1.0
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
-0.4
N.D.
N.D.
-0.8
stress
ALP with nitrate 75 mM
N.D.
-0.4
N.D.
N.D.
-0.8
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.6
N.D.
N.D.
-0.6
stress
ALP with Fusidic 0.01 mg/ml
N.D.
-0.2
N.D.
N.D.
-1.0
carbon source
a-Ketoglutaric (C)
N.D.
-0.6
N.D.
N.D.
-0.7
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.6
N.D.
N.D.
-0.6
stress
ALP with nitrite 0.15 mM
N.D.
-0.4
N.D.
N.D.
-0.8
stress
ALP with sodium fluoride 40 mM
N.D.
-0.2
N.D.
N.D.
-1.0
stress
ALP with nitrite 0.3 mM
N.D.
-0.2
N.D.
N.D.
-0.9
stress
ALP with Cobalt chloride 0.2 mM
N.D.
-0.4
N.D.
N.D.
-0.7
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-0.8
N.D.
N.D.
-0.3
stress
ALP with Fusidic 0.02 mg/ml
N.D.
+0.1
N.D.
N.D.
-1.2
stress
ALP with perchlorate 12 mM
N.D.
+0.2
N.D.
N.D.
-1.1
stress
ALP with Fusidic 0.007 mg/ml
N.D.
+0.2
N.D.
N.D.
-1.0
carbon source
pyruvate (C)
N.D.
+0.3
N.D.
N.D.
-1.0
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