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Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2857 and Dsui_2858 overlap by 8 nucleotides
Dsui_2858 and Dsui_2859 are separated by 227 nucleotides
Dsui_2859 and Dsui_2860 are separated by 36 nucleotides
Dsui_2860 and Dsui_2861 are separated by 125 nucleotides
Dsui_2857: Dsui_2857 - lipoprotein releasing system, ATP-binding protein, at 3,046,670 to 3,047,419
_2857
Dsui_2858: Dsui_2858 - lipoprotein releasing system, transmembrane protein, LolC/E family, at 3,047,412 to 3,048,659
_2858
Dsui_2859: Dsui_2859 - hypothetical protein, at 3,048,887 to 3,049,954
_2859
Dsui_2860: Dsui_2860 - single-stranded-DNA-specific exonuclease RecJ, at 3,049,991 to 3,051,688
_2860
Dsui_2861: Dsui_2861 - DMT(drug/metabolite transporter) superfamily permease, at 3,051,814 to 3,052,710
_2861
Group
Condition
Dsui
_2857
Dsui
_2858
Dsui
_2859
Dsui
_2860
Dsui
_2861
stress
ALP with Zinc 2 mM
N.D.
N.D.
N.D.
N.D.
-1.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.8
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
N.D.
-0.8
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.8
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
D-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.6
stress
ALP with Zinc 1 mM
N.D.
N.D.
N.D.
N.D.
-0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.6
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
N.D.
N.D.
-0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.6
stress
ALP with nitrate 50 mM
N.D.
N.D.
N.D.
N.D.
-0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.6
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
N.D.
N.D.
-0.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.6
stress
ALP with nitrite 0.45 mM
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
N.D.
N.D.
-0.6
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.5
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
L-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
propionate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.4
stress
ALP with nitrite 0.15 mM
N.D.
N.D.
N.D.
N.D.
-0.4
stress
ALP with nitrate 75 mM
N.D.
N.D.
N.D.
N.D.
-0.4
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
R2A with sodium pyruvate
N.D.
N.D.
N.D.
N.D.
-0.4
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
N.D.
N.D.
-0.4
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.4
stress
ALP with perchlorate 3 mM
N.D.
N.D.
N.D.
N.D.
-0.3
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
N.D.
N.D.
N.D.
+0.5
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