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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2816 and Dsui_2817 are separated by 184 nucleotides
Dsui_2817 and Dsui_2818 overlap by 1 nucleotides
Dsui_2818 and Dsui_2819 overlap by 31 nucleotides
Dsui_2819 and Dsui_2820 are separated by 1 nucleotides
Dsui_2816: Dsui_2816 - (p)ppGpp synthetase, RelA/SpoT family, at 2,991,497 to 2,993,719
_2816
Dsui_2817: Dsui_2817 - DMT(drug/metabolite transporter) superfamily permease, at 2,993,904 to 2,994,830
_2817
Dsui_2818: Dsui_2818 - hypothetical protein, at 2,994,830 to 2,995,630
_2818
Dsui_2819: Dsui_2819 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,995,600 to 2,996,373
_2819
Dsui_2820: Dsui_2820 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,996,375 to 2,997,280
_2820
Group
Condition
Dsui
_2816
Dsui
_2817
Dsui
_2818
Dsui
_2819
Dsui
_2820
alp richb
ALP
-5.9
-1.2
-1.0
-1.8
-1.3
stress
ALP with perchlorate 3 mM
-5.3
-1.7
-1.0
-1.2
-1.4
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-5.6
-1.2
-1.0
-1.8
-0.7
stress
ALP with nitrite 0.15 mM
-5.3
-0.8
-1.0
-1.8
-1.4
stress
ALP with nitrite 0.45 mM
-6.0
-0.4
-1.0
-1.8
-1.0
stress
ALP with nitrite 0.3 mM
-4.7
-1.2
-1.1
-1.9
-1.4
stress
ALP with sodium fluoride 40 mM
-5.8
-0.3
-0.9
-1.7
-1.3
stress
ALP with nitrate 50 mM
-4.8
-1.2
-1.0
-1.8
-1.1
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-4.8
-0.8
-1.0
-1.8
-1.4
stress
ALP with Zinc 2 mM
-5.4
-1.0
-0.8
-1.4
-1.2
stress
ALP with perchlorate 6 mM
-5.3
-0.6
-1.0
-1.2
-1.4
stress
ALP with nitrate 75 mM
-4.8
-1.2
-1.0
-1.3
-1.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-5.0
+0.0
-1.0
-1.4
-1.8
stress
ALP with Zinc 1 mM
-4.7
-1.0
-0.8
-1.7
-0.9
stress
ALP with Nickel (II) chloride 1.5 mM
-5.4
-0.8
-0.6
-1.3
-0.9
stress
ALP with Chloride 75 mM
-4.8
-1.4
-0.9
-1.1
-0.8
stress
ALP with perchlorate 12 mM
-3.9
-1.8
-0.8
-1.0
-1.2
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-5.2
-0.3
-0.7
-1.4
-0.9
No stressor control+ 10 mM ClO4 and 20 mM lactate
-5.3
+0.0
-0.9
-0.8
-1.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.3
-0.2
-1.1
-0.9
-1.9
carbon source
D-Lactate (C)
-5.0
-1.4
-0.5
-0.7
-0.8
carbon source
pyruvate (C)
-4.9
-1.3
-0.5
-0.7
-0.9
stress
ALP with Cisplatin 0.0008 mg/ml
-5.3
+0.1
-0.7
-1.3
-1.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-4.4
-0.0
-1.1
-0.7
-1.8
carbon source
L-Lactate (C)
-5.2
-1.0
-0.4
-0.6
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
-4.9
-0.0
-0.8
-0.8
-1.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.3
-0.0
-1.0
-1.1
-1.4
stress
ALP with sodium fluoride 30 mM
-4.3
+0.1
-0.6
-1.6
-1.2
carbon source
D,L-Lactate (C)
-5.3
-1.5
-0.5
-0.5
+0.3
stress
ALP with Nickel (II) chloride 3.5 mM
-5.5
+0.4
-0.4
-1.4
-0.4
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