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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2805 and Dsui_2806 are separated by 53 nucleotides
Dsui_2806 and Dsui_2807 are separated by 130 nucleotides
Dsui_2807 and Dsui_2808 are separated by 71 nucleotides
Dsui_2808 and Dsui_2809 are separated by 59 nucleotides
Dsui_2805: Dsui_2805 - EamA-like transporter family, at 2,976,598 to 2,977,467
_2805
Dsui_2806: Dsui_2806 - PAS domain S-box, at 2,977,521 to 2,980,562
_2806
Dsui_2807: Dsui_2807 - enoyl-CoA hydratase/carnithine racemase, at 2,980,693 to 2,981,481
_2807
Dsui_2808: Dsui_2808 - acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, at 2,981,553 to 2,983,211
_2808
Dsui_2809: Dsui_2809 - ABC-type uncharacterized transport system, auxiliary component, at 2,983,271 to 2,983,858
_2809
Group
Condition
Dsui
_2805
Dsui
_2806
Dsui
_2807
Dsui
_2808
Dsui
_2809
stress
ALP with Nickel (II) chloride 2.5 mM
-3.1
+0.0
-1.9
+0.1
-0.4
stress
ALP with perchlorate 3 mM
-1.0
-0.9
-1.5
+0.1
-1.9
stress
ALP with Fusidic 0.007 mg/ml
-2.0
+0.0
-1.7
+0.1
-1.7
carbon source
a-Ketoglutaric (C)
-1.3
+0.0
-1.6
-0.1
-1.6
stress
ALP with sodium fluoride 30 mM
-2.9
-0.3
-0.3
+0.1
-1.0
stress
ALP with perchlorate 12 mM
-0.8
-0.2
-1.3
+0.0
-1.8
stress
ALP with Nickel (II) chloride 1.5 mM
-0.4
-0.5
-2.0
-0.2
-0.9
carbon source
a-Ketoglutaric (C)
-0.6
+0.1
-1.6
-0.4
-1.6
stress
ALP with Zinc 1 mM
-1.3
-0.5
-1.3
+0.2
-1.0
stress
ALP with Fusidic 0.02 mg/ml
-1.2
-0.2
-0.9
+0.1
-1.6
stress
ALP with Zinc 2 mM
-0.9
-0.4
-1.4
+0.1
-1.1
stress
ALP with nitrite 0.15 mM
-2.2
-0.4
-1.0
-0.1
+0.1
carbon source
L-Lactate (C)
-1.1
+0.1
-1.1
+0.2
-1.6
stress
ALP with Nickel (II) chloride 3.5 mM
-2.2
-0.4
-0.2
+0.3
-0.9
stress
ALP with Cisplatin 0.0007 mg/ml
-1.4
+0.0
-1.1
-0.1
-0.8
stress
ALP with Fusidic 0.01 mg/ml
-0.6
-0.3
-0.9
+0.2
-1.7
stress
ALP with nitrite 0.3 mM
-0.9
-0.7
-0.8
+0.3
-1.2
stress
ALP with perchlorate 6 mM
-0.5
+0.3
-1.3
+0.2
-1.9
stress
ALP with Cisplatin 0.0009 mg/ml
-0.4
-0.4
-1.5
+0.1
-0.9
carbon source
D-Lactate (C)
-0.2
-0.4
-1.1
+0.1
-1.5
carbon source
pyruvate (C)
-0.2
-0.2
-1.2
+0.2
-1.7
carbon source
D-Lactate (C)
-0.3
-0.1
-1.1
+0.1
-1.6
stress
ALP with nitrate 75 mM
-1.1
-0.5
-0.4
+0.2
-1.1
stress
ALP with Chloride 75 mM
+0.2
-0.3
-0.8
+0.0
-1.9
carbon source
D,L-Lactate (C)
-0.1
+0.3
-1.5
+0.2
-1.6
alp richb
ALP
-0.8
-0.6
-0.4
+0.2
-1.1
stress
ALP with Bacitracin 0.2 mg/ml
-0.1
+0.4
-1.1
-0.0
-1.9
carbon source
propionate (C)
+0.6
-0.4
-1.3
+0.5
-1.5
carbon source
propionate (C)
-1.4
-0.3
-1.0
+0.6
+0.1
stress
ALP with nitrite 0.45 mM
-0.9
-0.3
-1.1
+0.2
+2.0
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