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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2777 and Dsui_2778 are separated by 142 nucleotides
Dsui_2778 and Dsui_2779 are separated by 183 nucleotides
Dsui_2779 and Dsui_2780 are separated by 13 nucleotides
Dsui_2780 and Dsui_2781 are separated by 14 nucleotides
Dsui_2777: Dsui_2777 - aminoacyl-histidine dipeptidase, at 2,939,292 to 2,940,860
_2777
Dsui_2778: Dsui_2778 - isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase, at 2,941,003 to 2,941,524
_2778
Dsui_2779: Dsui_2779 - PAS domain S-box, at 2,941,708 to 2,944,797
_2779
Dsui_2780: Dsui_2780 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 2,944,811 to 2,945,245
_2780
Dsui_2781: Dsui_2781 - PAS domain S-box, at 2,945,260 to 2,949,126
_2781
Group
Condition
Dsui
_2777
Dsui
_2778
Dsui
_2779
Dsui
_2780
Dsui
_2781
carbon source
R2A with sodium pyruvate
-0.1
+0.2
N.D.
N.D.
-2.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
+0.1
N.D.
N.D.
-1.9
stress
ALP with Cisplatin 0.0008 mg/ml
+0.0
-0.3
N.D.
N.D.
-1.3
stress
ALP with Zinc 2 mM
-0.1
-0.4
N.D.
N.D.
-1.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.1
-0.7
N.D.
N.D.
-0.9
carbon source
a-Ketoglutaric (C)
-0.3
-0.5
N.D.
N.D.
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
-0.2
N.D.
N.D.
-1.3
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.0
-0.5
N.D.
N.D.
-0.8
carbon source
L-Lactate (C)
-0.0
-0.8
N.D.
N.D.
-0.5
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.2
+0.0
N.D.
N.D.
-1.6
stress
ALP with Nickel (II) chloride 3.5 mM
-0.2
+0.1
N.D.
N.D.
-1.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
-0.7
N.D.
N.D.
-0.7
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.3
+0.0
N.D.
N.D.
-1.1
carbon source
R2A with sodium pyruvate
-0.1
+0.1
N.D.
N.D.
-1.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.1
-0.3
N.D.
N.D.
-1.1
alp richb
ALP
+0.0
+0.3
N.D.
N.D.
-1.6
stress
ALP with Nickel (II) chloride 1.5 mM
-0.1
+0.2
N.D.
N.D.
-1.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
-0.4
N.D.
N.D.
-1.0
stress
ALP with nitrite 0.3 mM
+0.1
-0.2
N.D.
N.D.
-1.1
stress
rich media with sodium chlorite 0.16 mM
-0.1
+0.2
N.D.
N.D.
-1.2
stress
ALP with sodium fluoride 30 mM
+0.1
+0.1
N.D.
N.D.
-1.3
stress
ALP with Fusidic 0.02 mg/ml
+0.4
-0.6
N.D.
N.D.
-0.7
alp rich
rich media
+0.1
+0.2
N.D.
N.D.
-1.2
stress
ALP with nitrate 50 mM
+0.2
+0.6
N.D.
N.D.
-1.6
stress
ALP with Cobalt chloride 0.25 mM
-0.1
+0.5
N.D.
N.D.
-1.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.1
+0.3
N.D.
N.D.
-1.1
stress
ALP with perchlorate 12 mM
+0.2
+0.2
N.D.
N.D.
-1.0
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.1
+0.6
N.D.
N.D.
-1.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
+0.5
N.D.
N.D.
-0.7
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.7
-0.0
N.D.
N.D.
-0.7
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