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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2699 and Dsui_2700 are separated by 13 nucleotides
Dsui_2700 and Dsui_2701 overlap by 17 nucleotides
Dsui_2701 and Dsui_2702 overlap by 1 nucleotides
Dsui_2702 and Dsui_2703 are separated by 22 nucleotides
Dsui_2699: Dsui_2699 - hypoxanthine-guanine phosphoribosyltransferase, at 2,851,698 to 2,852,246
_2699
Dsui_2700: Dsui_2700 - UTP-glucose-1-phosphate uridylyltransferase, at 2,852,260 to 2,853,126
_2700
Dsui_2701: Dsui_2701 - DNA ligase, NAD-dependent, at 2,853,110 to 2,855,500
_2701
Dsui_2702: Dsui_2702 - cell division protein, at 2,855,500 to 2,856,933
_2702
Dsui_2703: Dsui_2703 - chromosome segregation protein SMC, at 2,856,956 to 2,860,465
_2703
Group
Condition
Dsui
_2699
Dsui
_2700
Dsui
_2701
Dsui
_2702
Dsui
_2703
stress
ALP with Cisplatin 0.0007 mg/ml
+0.5
N.D.
N.D.
-3.7
-3.3
stress
ALP with Cisplatin 0.0009 mg/ml
+0.6
N.D.
N.D.
-4.0
-3.1
stress
ALP with Cisplatin 0.0008 mg/ml
+0.3
N.D.
N.D.
-3.7
-2.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
N.D.
-2.6
-3.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
N.D.
-2.3
-3.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
N.D.
N.D.
-2.1
-3.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.9
N.D.
N.D.
-2.8
-3.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
N.D.
-2.2
-3.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.9
N.D.
N.D.
-2.2
-3.5
stress
ALP with Bacitracin 0.2 mg/ml
-0.3
N.D.
N.D.
-0.5
-3.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
+1.0
N.D.
N.D.
-2.4
-3.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.6
N.D.
N.D.
-1.6
-3.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.0
N.D.
N.D.
-0.7
-3.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+1.1
N.D.
N.D.
-2.3
-3.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+1.0
N.D.
N.D.
-2.0
-3.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+1.3
N.D.
N.D.
-1.9
-3.3
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.5
N.D.
N.D.
-2.6
-0.5
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.0
N.D.
N.D.
-0.3
-2.9
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.2
N.D.
N.D.
-0.9
-2.6
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.7
N.D.
N.D.
-2.1
-1.8
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.2
N.D.
N.D.
-2.7
-0.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.3
N.D.
N.D.
-0.5
-2.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.0
N.D.
N.D.
-0.9
-2.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.8
N.D.
N.D.
-1.4
-0.8
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+1.0
N.D.
N.D.
-1.4
-2.5
carbon source
D-Lactate (C)
-0.8
N.D.
N.D.
-0.8
-1.2
carbon source
a-Ketoglutaric (C)
-0.8
N.D.
N.D.
-0.6
-1.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.1
N.D.
N.D.
-0.2
-2.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.1
N.D.
N.D.
-0.4
-2.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
N.D.
N.D.
-0.6
-2.0
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