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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2677 and Dsui_2678 are separated by 85 nucleotides
Dsui_2678 and Dsui_2679 are separated by 117 nucleotides
Dsui_2679 and Dsui_2680 are separated by 3 nucleotides
Dsui_2680 and Dsui_2681 overlap by 20 nucleotides
Dsui_2677: Dsui_2677 - phosphoenolpyruvate synthase, at 2,828,221 to 2,830,596
_2677
Dsui_2678: Dsui_2678 - hypothetical protein, at 2,830,682 to 2,831,524
_2678
Dsui_2679: Dsui_2679 - rRNA methylase, at 2,831,642 to 2,832,418
_2679
Dsui_2680: Dsui_2680 - ribonuclease HII, at 2,832,422 to 2,833,018
_2680
Dsui_2681: Dsui_2681 - lipid-A-disaccharide synthase, at 2,832,999 to 2,834,186
_2681
Group
Condition
Dsui
_2677
Dsui
_2678
Dsui
_2679
Dsui
_2680
Dsui
_2681
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.6
-0.6
-0.3
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.3
-0.6
-0.4
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.3
-0.5
-0.4
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.3
-0.3
-0.1
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.3
+0.1
-0.2
N.D.
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-0.7
-0.2
-0.4
N.D.
carbon source
D-Lactate (C)
N.D.
-1.2
+0.2
+0.3
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.2
+0.4
+0.4
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.0
+0.5
+0.3
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
+0.4
+0.2
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
+0.5
+0.3
N.D.
carbon source
D-Lactate (C)
N.D.
-0.7
+0.5
+0.1
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
+0.6
+0.2
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
+0.5
+0.3
N.D.
alp richb
ALP
N.D.
+0.2
-0.5
+0.4
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
+0.5
+0.4
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
+0.6
+0.2
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
+0.5
+0.3
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.6
+0.6
+0.4
N.D.
stress
ALP with Cobalt chloride 0.2 mM
N.D.
+0.6
-0.3
+0.3
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
-0.2
+0.6
+0.5
N.D.
stress
ALP with nitrate 75 mM
N.D.
+0.6
-0.1
+0.4
N.D.
stress
ALP with nitrate 50 mM
N.D.
+0.6
-0.1
+0.5
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+2.2
-0.6
-0.6
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+2.2
-0.3
-0.3
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+2.4
-0.1
-0.5
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+2.4
-0.0
+0.1
N.D.
stress
ALP with Fusidic 0.007 mg/ml
N.D.
+0.4
+2.0
+0.3
N.D.
stress
ALP with Fusidic 0.02 mg/ml
N.D.
+0.5
+2.0
+0.4
N.D.
stress
ALP with Fusidic 0.01 mg/ml
N.D.
+0.4
+2.2
+0.4
N.D.
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