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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2674 and Dsui_2675 are separated by 60 nucleotides
Dsui_2675 and Dsui_2676 overlap by 1 nucleotides
Dsui_2676 and Dsui_2677 are separated by 199 nucleotides
Dsui_2677 and Dsui_2678 are separated by 85 nucleotides
Dsui_2674: Dsui_2674 - oligoketide cyclase/lipid transport protein, at 2,826,463 to 2,826,894
_2674
Dsui_2675: Dsui_2675 - SsrA-binding protein, at 2,826,955 to 2,827,401
_2675
Dsui_2676: Dsui_2676 - putative membrane protein, at 2,827,401 to 2,828,021
_2676
Dsui_2677: Dsui_2677 - phosphoenolpyruvate synthase, at 2,828,221 to 2,830,596
_2677
Dsui_2678: Dsui_2678 - hypothetical protein, at 2,830,682 to 2,831,524
_2678
Group
Condition
Dsui
_2674
Dsui
_2675
Dsui
_2676
Dsui
_2677
Dsui
_2678
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
-3.1
N.D.
-0.7
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
-0.9
N.D.
-1.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
-0.5
N.D.
-1.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
-0.1
N.D.
-1.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
+0.2
N.D.
-1.6
carbon source
D-Lactate (C)
N.D.
N.D.
+0.0
N.D.
-1.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.1
N.D.
-1.3
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
-1.3
N.D.
+0.5
stress
ALP with Zinc 1 mM
N.D.
N.D.
-1.2
N.D.
+0.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.6
N.D.
-1.2
carbon source
D-Lactate (C)
N.D.
N.D.
+0.4
N.D.
-0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.7
N.D.
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.7
N.D.
-0.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+1.0
N.D.
-1.0
stress
ALP with nitrate 75 mM
N.D.
N.D.
-0.7
N.D.
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.7
N.D.
-0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.7
N.D.
-0.7
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.7
N.D.
-0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+1.1
N.D.
-0.9
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
-0.5
N.D.
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+1.0
N.D.
-0.8
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
+1.1
N.D.
-0.4
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
+0.9
N.D.
-0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+1.3
N.D.
-0.6
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
+0.5
N.D.
+0.6
stress
ALP with perchlorate 3 mM
N.D.
N.D.
+0.9
N.D.
+0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.7
N.D.
+2.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.5
N.D.
+2.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.2
N.D.
+2.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.2
N.D.
+2.4
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