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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2659 and Dsui_2660 are separated by 114 nucleotides
Dsui_2660 and Dsui_2661 overlap by 4 nucleotides
Dsui_2661 and Dsui_2662 are separated by 139 nucleotides
Dsui_2662 and Dsui_2663 are separated by 21 nucleotides
Dsui_2659: Dsui_2659 - cold shock protein, at 2,814,520 to 2,814,723
_2659
Dsui_2660: Dsui_2660 - hypothetical protein, at 2,814,838 to 2,815,320
_2660
Dsui_2661: Dsui_2661 - cytosine/adenosine deaminase, at 2,815,317 to 2,815,778
_2661
Dsui_2662: Dsui_2662 - hypothetical protein, at 2,815,918 to 2,816,817
_2662
Dsui_2663: Dsui_2663 - hypothetical protein, at 2,816,839 to 2,817,024
_2663
Group
Condition
Dsui
_2659
Dsui
_2660
Dsui
_2661
Dsui
_2662
Dsui
_2663
carbon source
a-Ketoglutaric (C)
+0.2
N.D.
N.D.
-1.4
-1.5
stress
ALP with copper (II) chloride 0.6 mM
-0.1
N.D.
N.D.
+0.6
-3.1
stress
ALP with perchlorate 12 mM
+0.3
N.D.
N.D.
-1.3
-1.4
stress
ALP with Cisplatin 0.0009 mg/ml
+0.1
N.D.
N.D.
-1.1
-1.2
carbon source
D-Lactate (C)
+0.2
N.D.
N.D.
-0.4
-2.0
carbon source
L-Lactate (C)
+0.3
N.D.
N.D.
-1.6
-0.6
stress
ALP with Fusidic 0.01 mg/ml
+0.1
N.D.
N.D.
-1.3
-0.6
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.3
N.D.
N.D.
-0.8
-1.3
stress
ALP with Fusidic 0.02 mg/ml
+0.2
N.D.
N.D.
-1.5
-0.3
carbon source
L-Lactate (C)
+0.3
N.D.
N.D.
-0.9
-0.9
stress
ALP with Fusidic 0.007 mg/ml
+0.1
N.D.
N.D.
-2.3
+0.6
carbon source
D,L-Lactate (C)
+0.2
N.D.
N.D.
-0.9
-0.7
stress
ALP with perchlorate 6 mM
+0.3
N.D.
N.D.
-1.1
-0.6
stress
ALP with Chloride 75 mM
+0.4
N.D.
N.D.
-1.0
-0.6
carbon source
propionate (C)
+0.3
N.D.
N.D.
-0.4
-1.0
stress
ALP with perchlorate 3 mM
+0.3
N.D.
N.D.
-0.7
-0.7
stress
ALP with Bacitracin 0.2 mg/ml
+0.3
N.D.
N.D.
-0.5
-0.7
stress
ALP with Cobalt chloride 0.25 mM
+0.3
N.D.
N.D.
-0.8
-0.5
carbon source
propionate (C)
+0.4
N.D.
N.D.
-0.9
-0.4
alp richb
ALP
+0.4
N.D.
N.D.
-0.8
-0.5
stress
ALP with Zinc 2 mM
+0.5
N.D.
N.D.
-0.6
-0.7
stress
ALP with nitrate 50 mM
+0.5
N.D.
N.D.
-0.8
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+1.0
N.D.
N.D.
-0.3
-0.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.8
N.D.
N.D.
+0.4
+0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.9
N.D.
N.D.
+0.5
+0.4
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+1.2
N.D.
N.D.
+0.4
+0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+1.0
N.D.
N.D.
+0.4
+0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+1.0
N.D.
N.D.
+0.4
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
+1.1
N.D.
N.D.
+0.5
+0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+1.1
N.D.
N.D.
+0.4
+0.5
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