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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2652 and Dsui_2653 are separated by 29 nucleotides
Dsui_2653 and Dsui_2654 are separated by 16 nucleotides
Dsui_2654 and Dsui_2655 overlap by 4 nucleotides
Dsui_2655 and Dsui_2656 are separated by 13 nucleotides
Dsui_2652: Dsui_2652 - hydrolase, TatD family, at 2,808,188 to 2,808,970
_2652
Dsui_2653: Dsui_2653 - Tfp pilus assembly protein PilZ, at 2,809,000 to 2,809,386
_2653
Dsui_2654: Dsui_2654 - DNA polymerase III, delta'' subunit, at 2,809,403 to 2,810,428
_2654
Dsui_2655: Dsui_2655 - thymidylate kinase, at 2,810,425 to 2,811,036
_2655
Dsui_2656: Dsui_2656 - conserved hypothetical protein, YceG family, at 2,811,050 to 2,812,045
_2656
Group
Condition
Dsui
_2652
Dsui
_2653
Dsui
_2654
Dsui
_2655
Dsui
_2656
stress
ALP with Cisplatin 0.0009 mg/ml
-0.1
+0.2
N.D.
N.D.
-1.1
stress
ALP with Cisplatin 0.0007 mg/ml
+0.1
+0.0
N.D.
N.D.
-1.0
stress
ALP with Cisplatin 0.0008 mg/ml
+0.1
+0.3
N.D.
N.D.
-0.9
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+0.3
+0.2
N.D.
N.D.
-0.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.6
+0.8
N.D.
N.D.
-0.4
carbon source
R2A with sodium pyruvate
+0.6
+0.2
N.D.
N.D.
+0.2
carbon source
defined media with 30 mM sodium lactate
+0.4
+0.3
N.D.
N.D.
+0.3
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.3
+0.1
N.D.
N.D.
+0.7
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.4
+0.3
N.D.
N.D.
+0.4
carbon source
defined media with 30 mM sodium lactate
+0.3
+0.6
N.D.
N.D.
+0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.7
+1.1
N.D.
N.D.
-0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.5
+0.4
N.D.
N.D.
+0.3
alp rich
rich media
+0.4
+0.6
N.D.
N.D.
+0.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.5
+0.5
N.D.
N.D.
+0.2
carbon source
R2A with sodium pyruvate
+0.1
+0.9
N.D.
N.D.
+0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.4
+0.1
N.D.
N.D.
+0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.6
+0.9
N.D.
N.D.
-0.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.8
+0.8
N.D.
N.D.
-0.3
stress
rich media with sodium chlorite 0.16 mM
+0.6
+0.4
N.D.
N.D.
+0.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.8
+0.9
N.D.
N.D.
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.3
+0.3
N.D.
N.D.
+0.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
+0.4
N.D.
N.D.
+0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.8
+1.0
N.D.
N.D.
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
+1.0
N.D.
N.D.
-0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.9
+1.3
N.D.
N.D.
-0.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+1.0
+1.0
N.D.
N.D.
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.7
+1.2
N.D.
N.D.
-0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.8
+1.0
N.D.
N.D.
-0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.9
+1.1
N.D.
N.D.
-0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.9
+1.2
N.D.
N.D.
-0.1
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