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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2623 and Dsui_2625 are separated by 674 nucleotides
Dsui_2625 and Dsui_2626 are separated by 93 nucleotides
Dsui_2626 and Dsui_2627 are separated by 311 nucleotides
Dsui_2627 and Dsui_2628 are separated by 107 nucleotides
Dsui_2623: Dsui_2623 - site-specific recombinase XerD, at 2,776,311 to 2,777,489
_2623
Dsui_2625: Dsui_2625 - hypothetical protein, at 2,778,164 to 2,778,934
_2625
Dsui_2626: Dsui_2626 - Plasmid replication region DNA-binding N-term protein, at 2,779,028 to 2,780,104
_2626
Dsui_2627: Dsui_2627 - hypothetical protein, at 2,780,416 to 2,780,808
_2627
Dsui_2628: Dsui_2628 - Copper resistance protein K, at 2,780,916 to 2,781,197
_2628
Group
Condition
Dsui
_2623
Dsui
_2625
Dsui
_2626
Dsui
_2627
Dsui
_2628
stress
ALP with copper (II) chloride 0.6 mM
-0.3
-1.2
-1.4
-0.5
-1.6
alp rich
rich media
-0.4
-0.4
-0.4
-0.4
-0.5
alp rich
rich media
-0.4
-0.4
-0.3
-0.4
-0.3
stress
ALP with Zinc 2 mM
+0.1
-0.5
+0.3
-1.0
-0.6
stress
ALP with Cobalt chloride 0.2 mM
+0.1
-0.3
+0.2
-0.9
-0.7
stress
ALP with Cisplatin 0.0009 mg/ml
+0.0
-0.3
+0.0
-0.7
-0.6
stress
ALP with Zinc 1 mM
+0.1
-0.3
+0.2
-1.0
-0.5
stress
ALP with nitrate 75 mM
+0.1
-0.3
+0.2
-1.0
-0.5
stress
ALP with nitrite 0.3 mM
+0.1
-0.1
+0.2
-1.0
-0.6
stress
ALP with nitrate 50 mM
+0.1
-0.1
+0.2
-1.2
-0.6
stress
ALP with Cobalt chloride 0.25 mM
+0.1
-0.3
+0.2
-0.7
-0.8
carbon source
a-Ketoglutaric (C)
+0.0
-0.1
+0.1
-0.6
-0.8
stress
ALP with Dimethyl Sulfoxide 2 vol%
+0.2
-0.3
+0.2
-0.9
-0.6
carbon source
L-Lactate (C)
+0.1
-0.2
+0.2
-0.7
-0.8
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.0
-0.1
+0.2
-0.9
-0.5
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+0.1
-0.3
+0.1
-0.9
-0.4
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.1
-0.2
+0.2
-1.0
-0.3
carbon source
propionate (C)
+0.1
-0.2
+0.2
-0.6
-0.6
carbon source
pyruvate (C)
+0.1
-0.2
+0.2
-0.7
-0.6
stress
ALP with nitrite 0.15 mM
+0.1
-0.1
+0.2
-0.9
-0.4
stress
ALP with sodium fluoride 30 mM
+0.2
-0.0
+0.3
-0.9
-0.6
carbon source
D,L-Lactate (C)
+0.2
-0.1
+0.2
-0.6
-0.7
stress
ALP with nitrite 0.45 mM
+0.2
-0.1
+0.2
-1.0
-0.3
carbon source
L-Lactate (C)
+0.2
-0.2
+0.2
-0.7
-0.4
stress
ALP with perchlorate 3 mM
+0.2
-0.1
+0.2
-0.9
-0.4
stress
ALP with Chloride 75 mM
+0.2
-0.1
+0.2
-0.9
-0.3
stress
ALP with Bacitracin 0.2 mg/ml
+0.3
-0.1
+0.3
-0.9
-0.1
stress
ALP with Nickel (II) chloride 2.5 mM
+0.4
-0.1
+0.6
-0.3
-0.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
+0.6
+0.7
-0.1
+0.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.7
+0.8
+0.8
+0.2
+0.5
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