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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2609 and Dsui_2610 are separated by 78 nucleotides
Dsui_2610 and Dsui_2611 are separated by 7 nucleotides
Dsui_2611 and Dsui_2612 overlap by 4 nucleotides
Dsui_2612 and Dsui_2613 overlap by 4 nucleotides
Dsui_2609: Dsui_2609 - hypothetical protein, at 2,764,620 to 2,764,883
_2609
Dsui_2610: Dsui_2610 - single-stranded DNA-binding protein, at 2,764,962 to 2,765,330
_2610
Dsui_2611: Dsui_2611 - hypothetical protein, at 2,765,338 to 2,765,667
_2611
Dsui_2612: Dsui_2612 - hypothetical protein, at 2,765,664 to 2,766,197
_2612
Dsui_2613: Dsui_2613 - integrating conjugative element protein, PFL_4669 family, at 2,766,194 to 2,767,207
_2613
Group
Condition
Dsui
_2609
Dsui
_2610
Dsui
_2611
Dsui
_2612
Dsui
_2613
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.1
-3.7
-4.0
-2.2
-0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.4
-2.7
-4.1
-2.5
-0.4
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-3.4
-2.7
-3.6
-1.6
-0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-4.1
-2.8
-2.8
-1.2
-0.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.9
-2.6
-2.3
-1.7
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.0
-2.8
-3.6
-1.3
-0.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.3
-3.3
-2.1
-1.2
-0.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
-2.2
-3.0
-3.5
-1.1
-0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.6
-4.1
-2.5
-0.4
-0.4
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-2.7
-3.9
-1.4
-1.2
-0.5
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-2.6
-2.3
-2.5
-1.3
-0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.1
-2.4
-3.1
-0.9
-0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.5
-2.6
-2.0
-0.9
-0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.6
-1.5
-1.6
-0.2
+0.2
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-1.1
+0.8
-1.6
-0.0
-0.5
stress
ALP with Chloride 75 mM
+0.4
-1.3
+0.6
-1.6
-0.4
stress
ALP with perchlorate 6 mM
+0.4
-1.3
+0.6
-1.6
-0.2
stress
ALP with perchlorate 3 mM
+0.4
-1.3
+0.6
-1.7
+0.0
stress
ALP with Fusidic 0.007 mg/ml
+0.6
-1.1
+0.8
-1.4
-0.6
stress
ALP with Bacitracin 0.2 mg/ml
+0.6
-1.2
+0.7
-1.5
-0.0
carbon source
pyruvate (C)
+0.6
-1.0
+0.8
-1.3
-0.5
stress
ALP with Fusidic 0.02 mg/ml
+0.7
-1.0
+0.9
-1.3
-0.5
carbon source
pyruvate (C)
+0.8
-1.0
+0.9
-1.3
-0.5
carbon source
D,L-Lactate (C)
+0.7
-1.1
+0.9
-1.4
-0.1
carbon source
D,L-Lactate (C)
+0.8
-1.0
+1.0
-1.3
-0.2
stress
ALP with Fusidic 0.01 mg/ml
+0.8
-1.0
+1.0
-1.3
-0.3
carbon source
L-Lactate (C)
+0.8
-0.9
+1.0
-1.2
-0.3
carbon source
propionate (C)
+1.0
-0.9
+1.4
-1.2
-0.1
carbon source
a-Ketoglutaric (C)
+1.1
-0.7
+1.2
-1.0
-0.5
carbon source
a-Ketoglutaric (C)
+1.1
-0.7
+1.3
-1.0
-0.1
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