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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2535 and Dsui_2536 overlap by 66 nucleotides
Dsui_2536 and Dsui_2537 are separated by 205 nucleotides
Dsui_2537 and Dsui_2538 are separated by 108 nucleotides
Dsui_2538 and Dsui_2539 are separated by 153 nucleotides
Dsui_2535: Dsui_2535 - putative divalent heavy-metal cations transporter, at 2,687,001 to 2,687,774
_2535
Dsui_2536: Dsui_2536 - hypothetical protein, at 2,687,709 to 2,688,020
_2536
Dsui_2537: Dsui_2537 - poly(R)-hydroxyalkanoic acid synthase, class I, at 2,688,226 to 2,689,965
_2537
Dsui_2538: Dsui_2538 - acetoacetyl-CoA reductase, at 2,690,074 to 2,690,814
_2538
Dsui_2539: Dsui_2539 - polyhydroxyalkanoate synthesis repressor PhaR, at 2,690,968 to 2,691,531
_2539
Group
Condition
Dsui
_2535
Dsui
_2536
Dsui
_2537
Dsui
_2538
Dsui
_2539
stress
ALP with Cisplatin 0.0008 mg/ml
-1.0
-0.6
N.D.
-0.5
-0.3
stress
ALP with Cisplatin 0.0007 mg/ml
-1.1
-0.5
N.D.
-0.3
-0.2
stress
ALP with copper (II) chloride 0.6 mM
-2.2
+0.2
N.D.
-0.7
+0.6
stress
ALP with Nickel (II) chloride 1.5 mM
-0.7
-0.7
N.D.
+0.0
-0.5
carbon source
defined media with 40 mM sodium acetate
-0.8
+0.3
N.D.
+0.2
-1.3
stress
ALP with Cisplatin 0.0009 mg/ml
-1.4
-0.2
N.D.
-0.4
+0.5
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.5
-0.4
N.D.
-0.7
-0.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
+1.1
N.D.
-1.9
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
+1.3
N.D.
-1.3
-0.5
stress
ALP with Nickel (II) chloride 2.5 mM
-1.4
+0.1
N.D.
+0.7
+0.3
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.5
+0.4
N.D.
+0.6
-1.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.6
+1.2
N.D.
-0.9
-0.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.7
+0.6
N.D.
-0.6
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
+1.0
N.D.
-0.9
-0.0
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.5
+0.9
N.D.
-0.5
+0.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.9
+0.6
N.D.
+0.7
+0.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
+0.8
N.D.
-0.5
+0.4
stress
ALP with Fusidic 0.02 mg/ml
+0.6
-0.1
N.D.
-0.3
+1.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.5
+0.5
N.D.
+0.8
+0.6
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.7
+1.0
N.D.
-0.6
+0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.9
+1.1
N.D.
-0.4
-0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.5
+0.6
N.D.
+0.6
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.7
+1.0
N.D.
-0.5
+0.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.5
+0.4
N.D.
+1.3
+0.4
stress
ALP with Fusidic 0.007 mg/ml
+0.4
+0.2
N.D.
-0.2
+1.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.3
+0.7
N.D.
+0.7
+0.5
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.3
+0.5
N.D.
+1.4
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+1.0
+1.1
N.D.
-0.5
+0.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.4
+0.4
N.D.
+1.3
+0.8
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.1
+0.5
N.D.
+1.5
+0.3
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