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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2519 and Dsui_2520 are separated by 700 nucleotides
Dsui_2520 and Dsui_2521 are separated by 76 nucleotides
Dsui_2521 and Dsui_2522 are separated by 85 nucleotides
Dsui_2522 and Dsui_2523 are separated by 142 nucleotides
Dsui_2519: Dsui_2519 - methyl-accepting chemotaxis protein, at 2,669,565 to 2,671,214
_2519
Dsui_2520: Dsui_2520 - flagellar basal-body rod protein FlgF, at 2,671,915 to 2,672,661
_2520
Dsui_2521: Dsui_2521 - cysteine synthase A, at 2,672,738 to 2,673,724
_2521
Dsui_2522: Dsui_2522 - hypothetical protein, at 2,673,810 to 2,673,932
_2522
Dsui_2523: Dsui_2523 - hypothetical protein, at 2,674,075 to 2,674,617
_2523
Group
Condition
Dsui
_2519
Dsui
_2520
Dsui
_2521
Dsui
_2522
Dsui
_2523
stress
ALP with copper (II) chloride 0.6 mM
-0.3
-0.3
-0.6
-3.6
-0.2
stress
ALP with Nickel (II) chloride 1.5 mM
-1.0
-1.1
-0.2
-0.6
-0.2
stress
ALP with Fusidic 0.01 mg/ml
-1.0
-1.0
-0.2
-0.5
-0.4
stress
ALP with sodium fluoride 30 mM
-1.2
-1.2
+0.1
-0.5
-0.2
stress
ALP with nitrate 75 mM
-1.0
-1.3
-0.1
-0.2
-0.3
stress
ALP with Zinc 1 mM
-0.8
-1.2
-0.3
-0.4
-0.2
stress
ALP with perchlorate 6 mM
-1.0
-1.4
+0.0
-0.3
-0.2
stress
ALP with nitrate 50 mM
-0.8
-1.4
-0.0
-0.3
-0.2
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.8
-1.4
-0.1
-0.2
-0.2
stress
ALP with nitrite 0.45 mM
-1.3
-1.3
+0.1
+0.2
-0.2
stress
ALP with nitrite 0.3 mM
-0.8
-1.4
+0.0
-0.2
-0.2
stress
ALP with nitrite 0.15 mM
-0.8
-1.4
-0.1
-0.0
-0.2
stress
ALP with Cobalt chloride 0.2 mM
-0.9
-1.2
+0.0
-0.3
-0.1
carbon source
D-Lactate (C)
-0.5
-1.0
-0.6
-0.2
-0.3
stress
ALP with Nickel (II) chloride 3.5 mM
-0.7
-1.0
-0.3
-0.3
-0.2
carbon source
D-Lactate (C)
-0.9
-1.0
-0.2
-0.1
-0.2
stress
ALP with Chloride 75 mM
-1.1
-1.1
-0.1
+0.1
-0.1
stress
ALP with sodium fluoride 40 mM
-0.5
-1.3
-0.0
-0.2
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.1
-0.1
-0.3
-0.7
-0.2
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.6
-1.4
+0.0
-0.1
-0.2
stress
ALP with perchlorate 12 mM
-0.9
-1.3
+0.1
+0.0
-0.3
carbon source
pyruvate (C)
-0.6
-1.0
-0.0
-0.4
-0.2
alp richb
ALP
-0.6
-1.3
-0.1
-0.0
-0.3
stress
ALP with Zinc 2 mM
-0.8
-1.0
-0.3
+0.1
-0.0
stress
ALP with Cobalt chloride 0.25 mM
-1.0
-1.1
-0.1
+0.2
-0.1
stress
ALP with Cisplatin 0.0008 mg/ml
-0.7
-1.0
+0.2
-0.3
-0.1
stress
ALP with Bacitracin 0.2 mg/ml
-0.5
-1.2
-0.1
+0.3
-0.1
carbon source
pyruvate (C)
-0.6
-1.1
-0.1
+0.4
-0.1
carbon source
L-Lactate (C)
-0.5
-1.0
-0.0
+0.4
-0.2
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.6
+0.1
+0.1
+0.8
+0.6
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