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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2462 and Dsui_2463 are separated by 67 nucleotides
Dsui_2463 and Dsui_2464 are separated by 158 nucleotides
Dsui_2464 and Dsui_2465 overlap by 4 nucleotides
Dsui_2465 and Dsui_2466 are separated by 29 nucleotides
Dsui_2462: Dsui_2462 - DNA repair protein RecO, at 2,619,644 to 2,620,357
_2462
Dsui_2463: Dsui_2463 - pyridoxine 5''-phosphate synthase, at 2,620,425 to 2,621,177
_2463
Dsui_2464: Dsui_2464 - holo-(acyl-carrier-protein) synthase, at 2,621,336 to 2,621,725
_2464
Dsui_2465: Dsui_2465 - beta-glucosidase-like glycosyl hydrolase, at 2,621,722 to 2,622,747
_2465
Dsui_2466: Dsui_2466 - ATP dependent DNA ligase-like protein, at 2,622,777 to 2,623,622
_2466
Group
Condition
Dsui
_2462
Dsui
_2463
Dsui
_2464
Dsui
_2465
Dsui
_2466
stress
ALP with Cisplatin 0.0009 mg/ml
-6.1
N.D.
N.D.
-1.0
-1.0
stress
ALP with Cisplatin 0.0008 mg/ml
-5.6
N.D.
N.D.
-0.8
-1.0
stress
ALP with Cisplatin 0.0007 mg/ml
-5.2
N.D.
N.D.
-0.8
-1.1
stress
ALP with copper (II) chloride 0.6 mM
-0.7
N.D.
N.D.
-1.4
-0.6
stress
rich media with sodium chlorite 0.16 mM
+0.1
N.D.
N.D.
-0.5
-1.8
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+0.0
N.D.
N.D.
-0.9
-1.2
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.0
N.D.
N.D.
-0.8
-1.3
stress
ALP with nitrite 0.3 mM
-0.1
N.D.
N.D.
-0.7
-1.3
carbon source
D,L-Lactate (C)
-0.1
N.D.
N.D.
-0.7
-1.2
carbon source
R2A with sodium pyruvate
-0.0
N.D.
N.D.
-0.0
-1.9
carbon source
propionate (C)
+0.0
N.D.
N.D.
-1.0
-1.0
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.1
N.D.
N.D.
-0.6
-1.2
carbon source
a-Ketoglutaric (C)
-0.1
N.D.
N.D.
-0.9
-1.0
carbon source
D,L-Lactate (C)
+0.0
N.D.
N.D.
-0.8
-1.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.3
N.D.
N.D.
-0.1
-2.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.0
N.D.
N.D.
+0.7
-2.5
stress
ALP with nitrite 0.45 mM
-0.0
N.D.
N.D.
-0.6
-1.2
carbon source
L-Lactate (C)
-0.0
N.D.
N.D.
-0.7
-1.1
stress
ALP with Nickel (II) chloride 3.5 mM
+0.1
N.D.
N.D.
-0.8
-1.1
carbon source
pyruvate (C)
-0.1
N.D.
N.D.
-0.6
-1.2
stress
ALP with Zinc 1 mM
-0.0
N.D.
N.D.
-0.6
-1.1
stress
ALP with Zinc 2 mM
-0.0
N.D.
N.D.
-0.5
-1.2
alp rich
rich media
+0.0
N.D.
N.D.
+0.1
-1.7
stress
ALP with perchlorate 12 mM
+0.2
N.D.
N.D.
-0.5
-1.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.2
N.D.
N.D.
+0.6
-1.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.0
N.D.
N.D.
+0.4
-1.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.2
N.D.
N.D.
+0.6
-1.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.0
N.D.
N.D.
+0.8
-1.0
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.1
N.D.
N.D.
+0.9
-1.0
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.2
N.D.
N.D.
+1.2
-0.7
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