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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2430 and Dsui_2431 are separated by 54 nucleotides
Dsui_2431 and Dsui_2432 are separated by 62 nucleotides
Dsui_2432 and Dsui_2433 are separated by 76 nucleotides
Dsui_2433 and Dsui_2434 are separated by 143 nucleotides
Dsui_2430: Dsui_2430 - tRNA-Asn, at 2,589,847 to 2,589,922
_2430
Dsui_2431: Dsui_2431 - tRNA-Asn, at 2,589,977 to 2,590,052
_2431
Dsui_2432: Dsui_2432 - hypothetical protein, at 2,590,115 to 2,591,863
_2432
Dsui_2433: Dsui_2433 - aspartate/tyrosine/aromatic aminotransferase, at 2,591,940 to 2,593,148
_2433
Dsui_2434: Dsui_2434 - excinuclease ABC, B subunit, at 2,593,292 to 2,595,364
_2434
Group
Condition
Dsui
_2430
Dsui
_2431
Dsui
_2432
Dsui
_2433
Dsui
_2434
stress
ALP with Cisplatin 0.0009 mg/ml
-0.2
N.D.
-0.7
-2.1
-3.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.7
N.D.
-0.8
-4.7
-1.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.7
N.D.
-0.7
-5.1
-0.9
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.7
N.D.
-0.8
-4.8
-1.0
stress
ALP with Cisplatin 0.0008 mg/ml
-0.0
N.D.
-0.8
-1.8
-3.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
N.D.
-0.6
-4.8
-1.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.5
N.D.
-0.8
-4.6
-0.9
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.3
N.D.
-0.5
-4.6
-0.7
stress
ALP with Cisplatin 0.0007 mg/ml
+0.1
N.D.
-0.7
-1.9
-3.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
-0.5
-4.5
-1.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.7
N.D.
-0.9
-4.3
-0.9
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.6
N.D.
-0.6
-4.5
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
-0.5
-4.7
-0.9
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-0.6
-4.1
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
N.D.
-0.6
-4.3
-0.9
carbon source
D-Lactate (C)
+0.1
N.D.
-0.9
-3.4
-0.8
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.6
N.D.
-0.6
-4.3
-0.7
carbon source
L-Lactate (C)
+0.0
N.D.
-1.0
-3.2
-0.6
carbon source
D,L-Lactate (C)
+0.1
N.D.
-1.0
-3.0
-0.8
carbon source
D,L-Lactate (C)
+0.4
N.D.
-1.0
-3.6
-0.5
carbon source
D-Lactate (C)
+0.2
N.D.
-0.9
-3.1
-0.7
carbon source
pyruvate (C)
+0.4
N.D.
-1.0
-3.1
-0.8
carbon source
L-Lactate (C)
-0.1
N.D.
-0.7
-3.0
-0.5
carbon source
pyruvate (C)
+0.3
N.D.
-1.0
-3.0
-0.5
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.1
N.D.
+0.0
-2.5
-0.4
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.8
N.D.
-0.2
-2.9
-0.3
ALP with 3 all (C)s
+0.8
N.D.
-0.2
-2.9
-0.1
stress
ALP with Fusidic 0.007 mg/ml
+1.8
N.D.
-1.0
+2.4
-0.5
stress
ALP with Fusidic 0.02 mg/ml
+2.1
N.D.
-1.0
+2.3
-0.4
stress
ALP with Fusidic 0.01 mg/ml
+1.9
N.D.
-0.9
+2.6
-0.5
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