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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2421 and Dsui_2422 are separated by 47 nucleotides
Dsui_2422 and Dsui_2423 are separated by 270 nucleotides
Dsui_2423 and Dsui_2424 are separated by 5 nucleotides
Dsui_2424 and Dsui_2425 are separated by 39 nucleotides
Dsui_2421: Dsui_2421 - EAL domain-containing protein, at 2,579,922 to 2,581,223
_2421
Dsui_2422: Dsui_2422 - truncated hemoglobin, at 2,581,271 to 2,581,657
_2422
Dsui_2423: Dsui_2423 - GTP-binding protein TypA/BipA, at 2,581,928 to 2,583,742
_2423
Dsui_2424: Dsui_2424 - hypothetical protein, at 2,583,748 to 2,583,906
_2424
Dsui_2425: Dsui_2425 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,583,946 to 2,585,865
_2425
Group
Condition
Dsui
_2421
Dsui
_2422
Dsui
_2423
Dsui
_2424
Dsui
_2425
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.1
-0.6
N.D.
-2.5
-0.1
stress
ALP with copper (II) chloride 0.6 mM
-0.8
-0.3
N.D.
-1.9
-0.3
stress
ALP with Zinc 2 mM
+0.0
-0.4
N.D.
-2.5
-0.1
stress
ALP with nitrate 50 mM
+0.1
-0.6
N.D.
-2.5
+0.1
stress
ALP with nitrate 75 mM
+0.1
-0.5
N.D.
-2.5
+0.0
carbon source
D,L-Lactate (C)
-0.1
-0.7
N.D.
-1.9
-0.1
stress
ALP with Nickel (II) chloride 3.5 mM
+0.2
-0.5
N.D.
-2.4
+0.1
stress
ALP with sodium fluoride 30 mM
+0.2
-0.5
N.D.
-2.4
+0.1
stress
ALP with Nickel (II) chloride 1.5 mM
+0.1
-0.4
N.D.
-2.3
+0.1
carbon source
L-Lactate (C)
+0.0
-0.6
N.D.
-1.7
+0.1
alp richb
ALP
+0.2
-0.1
N.D.
-2.4
+0.1
stress
ALP with Dimethyl Sulfoxide 2 vol%
+0.1
-0.2
N.D.
-1.8
-0.3
stress
ALP with Bacitracin 0.2 mg/ml
+0.1
-0.2
N.D.
-1.9
-0.1
stress
ALP with perchlorate 3 mM
+0.3
-0.2
N.D.
-2.0
-0.1
stress
ALP with Cisplatin 0.0007 mg/ml
+0.1
+0.0
N.D.
-2.3
+0.3
stress
ALP with Zinc 1 mM
+0.1
-0.5
N.D.
-1.2
-0.1
stress
ALP with nitrite 0.15 mM
+0.1
-0.5
N.D.
-1.3
+0.0
stress
ALP with nitrite 0.3 mM
+0.2
-0.4
N.D.
-1.4
+0.0
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.1
-0.5
N.D.
-1.2
-0.0
carbon source
propionate (C)
-0.1
-1.0
N.D.
-0.4
-0.0
stress
ALP with Cobalt chloride 0.25 mM
+0.1
-0.3
N.D.
-1.1
-0.3
stress
ALP with Nickel (II) chloride 2.5 mM
+0.3
-0.3
N.D.
-1.8
+0.5
stress
ALP with sodium fluoride 40 mM
+0.2
-0.0
N.D.
-1.2
-0.1
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.1
-0.7
N.D.
-0.7
+0.1
stress
ALP with Cisplatin 0.0009 mg/ml
+0.0
-1.1
N.D.
-0.4
+0.4
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.2
+0.8
N.D.
-0.8
+0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
+0.6
N.D.
-0.2
+0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.6
+0.5
N.D.
-0.0
+0.4
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.4
+0.6
N.D.
+0.3
+0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.5
+0.5
N.D.
+0.3
+0.3
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