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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2410 and Dsui_2411 are separated by 121 nucleotides
Dsui_2411 and Dsui_2412 are separated by 125 nucleotides
Dsui_2412 and Dsui_2413 are separated by 33 nucleotides
Dsui_2413 and Dsui_2414 are separated by 102 nucleotides
Dsui_2410: Dsui_2410 - transcriptional regulator, at 2,561,325 to 2,562,227
_2410
Dsui_2411: Dsui_2411 - alanine racemase, at 2,562,349 to 2,563,440
_2411
Dsui_2412: Dsui_2412 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,563,566 to 2,566,304
_2412
Dsui_2413: Dsui_2413 - DNA repair protein RadA, at 2,566,338 to 2,567,711
_2413
Dsui_2414: Dsui_2414 - hypothetical protein, at 2,567,814 to 2,568,419
_2414
Group
Condition
Dsui
_2410
Dsui
_2411
Dsui
_2412
Dsui
_2413
Dsui
_2414
stress
ALP with copper (II) chloride 0.6 mM
-0.8
N.D.
-0.6
-1.6
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
-0.2
N.D.
-0.6
-1.5
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
-0.1
N.D.
-0.3
-1.4
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
+0.2
N.D.
-0.5
-1.3
N.D.
stress
ALP with Zinc 2 mM
-0.6
N.D.
-0.9
-0.2
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.7
N.D.
-0.2
+0.4
N.D.
stress
ALP with Nickel (II) chloride 3.5 mM
-0.2
N.D.
-1.2
-0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.2
N.D.
-0.3
+0.1
N.D.
stress
ALP with Bacitracin 0.2 mg/ml
-0.2
N.D.
-0.8
-0.2
N.D.
carbon source
D-Lactate (C)
-0.8
N.D.
-0.4
+0.0
N.D.
stress
ALP with sodium fluoride 30 mM
-0.0
N.D.
-1.0
-0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.8
N.D.
-0.3
-0.0
N.D.
stress
ALP with nitrite 0.45 mM
+0.0
N.D.
-1.0
-0.2
N.D.
stress
ALP with Cobalt chloride 0.2 mM
-0.2
N.D.
-1.0
+0.1
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.4
N.D.
-0.1
+0.5
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.7
N.D.
-0.4
+0.2
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
N.D.
-0.2
+0.6
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.0
N.D.
-0.3
+0.3
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.0
N.D.
-0.2
+0.4
N.D.
stress
ALP with perchlorate 3 mM
-0.1
N.D.
-0.8
+0.2
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+0.2
N.D.
-0.8
-0.1
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.2
N.D.
-0.1
+0.7
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.0
N.D.
-0.0
+0.6
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.2
N.D.
-0.0
+0.8
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.1
N.D.
-0.0
+0.8
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.9
N.D.
+0.0
+0.6
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
N.D.
-0.1
+0.5
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.1
N.D.
+0.1
+0.7
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.3
N.D.
-0.8
+0.3
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.9
N.D.
-0.0
+0.8
N.D.
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