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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2375 and Dsui_2376 overlap by 4 nucleotides
Dsui_2376 and Dsui_2377 are separated by 10 nucleotides
Dsui_2377 and Dsui_2378 are separated by 76 nucleotides
Dsui_2378 and Dsui_2379 are separated by 78 nucleotides
Dsui_2375: Dsui_2375 - Fe-S protein assembly chaperone HscA, at 2,524,637 to 2,526,517
_2375
Dsui_2376: Dsui_2376 - ferredoxin, 2Fe-2S type, ISC system, at 2,526,514 to 2,526,855
_2376
Dsui_2377: Dsui_2377 - FeS assembly protein IscX, at 2,526,866 to 2,527,060
_2377
Dsui_2378: Dsui_2378 - hypothetical protein, at 2,527,137 to 2,527,454
_2378
Dsui_2379: Dsui_2379 - phosphoserine phosphatase SerB, at 2,527,533 to 2,528,375
_2379
Group
Condition
Dsui
_2375
Dsui
_2376
Dsui
_2377
Dsui
_2378
Dsui
_2379
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.2
-1.1
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.1
-1.0
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
-0.7
-1.4
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-0.9
-1.0
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-0.9
-0.9
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-0.4
-1.1
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-0.8
-0.6
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-0.9
-0.5
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-0.8
-0.5
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-0.9
-0.3
N.D.
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
+0.4
-0.8
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.6
+0.5
N.D.
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
+0.6
-0.6
N.D.
stress
ALP with Fusidic 0.02 mg/ml
N.D.
N.D.
+0.9
-0.5
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
-0.3
+0.7
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
-0.4
+0.9
N.D.
stress
ALP with Fusidic 0.007 mg/ml
N.D.
N.D.
+1.0
-0.3
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.3
+1.1
N.D.
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
+0.7
+0.3
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
N.D.
+0.6
+0.5
N.D.
stress
ALP with Nickel (II) chloride 1.5 mM
N.D.
N.D.
+0.4
+0.7
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
+0.1
+1.0
N.D.
carbon source
R2A with sodium pyruvate
N.D.
N.D.
+0.3
+0.8
N.D.
stress
ALP with Zinc 1 mM
N.D.
N.D.
+0.5
+0.6
N.D.
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
N.D.
+0.5
+0.7
N.D.
stress
ALP with perchlorate 12 mM
N.D.
N.D.
+1.1
+0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
+0.7
+0.9
N.D.
carbon source
R2A with sodium pyruvate
N.D.
N.D.
+0.5
+1.2
N.D.
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
+1.2
+0.8
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
+1.5
+0.8
N.D.
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