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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2344 and Dsui_2345 are separated by 94 nucleotides
Dsui_2345 and Dsui_2346 are separated by 341 nucleotides
Dsui_2346 and Dsui_2347 are separated by 396 nucleotides
Dsui_2347 and Dsui_2348 are separated by 202 nucleotides
Dsui_2344: Dsui_2344 - hypothetical protein, at 2,495,391 to 2,495,612
_2344
Dsui_2345: Dsui_2345 - hypothetical protein, at 2,495,707 to 2,496,675
_2345
Dsui_2346: Dsui_2346 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 2,497,017 to 2,498,384
_2346
Dsui_2347: Dsui_2347 - aconitate hydratase 1, at 2,498,781 to 2,501,477
_2347
Dsui_2348: Dsui_2348 - hypothetical protein, at 2,501,680 to 2,502,048
_2348
Group
Condition
Dsui
_2344
Dsui
_2345
Dsui
_2346
Dsui
_2347
Dsui
_2348
stress
ALP with Chloride 75 mM
+0.1
-0.8
-0.2
-0.9
-2.8
carbon source
D,L-Lactate (C)
+0.0
-0.6
-0.1
-1.5
-1.8
stress
ALP with Bacitracin 0.2 mg/ml
-0.0
-0.7
-0.2
-1.0
-1.7
carbon source
pyruvate (C)
+0.0
-0.7
-0.0
-1.3
-1.6
carbon source
propionate (C)
+0.1
-0.6
+0.3
-1.2
-1.9
stress
ALP with perchlorate 6 mM
+0.1
-0.7
+0.2
-1.4
-1.5
stress
ALP with perchlorate 12 mM
+0.1
-0.7
-0.1
-1.4
-0.9
carbon source
D-Lactate (C)
-0.0
-0.6
-0.0
-0.6
-1.6
stress
ALP with Zinc 2 mM
-0.2
-0.8
-0.7
-1.1
-0.1
carbon source
L-Lactate (C)
+0.0
-0.6
-0.2
-0.8
-1.3
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.0
-0.7
+0.1
-1.2
-0.8
carbon source
propionate (C)
-0.0
-0.6
-0.1
-1.2
-0.7
stress
ALP with Fusidic 0.01 mg/ml
+0.3
-0.5
+0.2
-0.6
-2.0
carbon source
D,L-Lactate (C)
-0.1
-0.6
-0.1
-0.7
-1.1
carbon source
pyruvate (C)
-0.1
-0.7
-0.2
-0.8
-0.9
stress
ALP with Fusidic 0.007 mg/ml
+0.1
-0.6
-0.0
-0.9
-1.2
stress
ALP with perchlorate 3 mM
+0.1
-0.7
+0.0
-1.0
-0.7
stress
ALP with nitrite 0.45 mM
-0.0
-0.6
-0.3
-1.0
-0.3
carbon source
a-Ketoglutaric (C)
+0.1
-0.5
-0.0
-0.7
-1.1
carbon source
D-Lactate (C)
-0.1
-0.6
+0.1
-0.6
-1.0
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.1
-0.6
-0.4
-0.9
+0.4
stress
ALP with nitrate 75 mM
+0.0
-0.7
-0.2
-1.1
+0.4
stress
ALP with Cobalt chloride 0.25 mM
-0.4
-0.6
-0.5
-0.7
+0.6
stress
ALP with Zinc 1 mM
-0.1
-0.7
-0.4
-0.7
+0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.5
+0.3
-0.7
+0.0
-1.0
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.0
-0.6
-0.2
-0.8
+0.8
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.4
+0.3
-0.3
+0.3
-1.4
stress
ALP with nitrite 0.15 mM
-0.1
-0.7
-0.4
-0.8
+1.2
alp richb
ALP
+0.1
-0.6
-0.5
-0.5
+0.9
stress
ALP with Cisplatin 0.0008 mg/ml
+0.1
-0.5
-0.3
-0.5
+1.0
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