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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2311 and Dsui_2312 are separated by 207 nucleotides
Dsui_2312 and Dsui_2313 are separated by 144 nucleotides
Dsui_2313 and Dsui_2314 overlap by 4 nucleotides
Dsui_2314 and Dsui_2315 overlap by 1 nucleotides
Dsui_2311: Dsui_2311 - isochorismate hydrolase, at 2,467,054 to 2,467,596
_2311
Dsui_2312: Dsui_2312 - 3-hydroxybutyrate dehydrogenase, at 2,467,804 to 2,468,586
_2312
Dsui_2313: Dsui_2313 - CTP synthase, at 2,468,731 to 2,470,371
_2313
Dsui_2314: Dsui_2314 - 3-deoxy-8-phosphooctulonate synthase, at 2,470,368 to 2,471,207
_2314
Dsui_2315: Dsui_2315 - Stress responsive A/B Barrel Domain-containing protein, at 2,471,207 to 2,471,500
_2315
Group
Condition
Dsui
_2311
Dsui
_2312
Dsui
_2313
Dsui
_2314
Dsui
_2315
stress
ALP with Fusidic 0.007 mg/ml
N.D.
-2.1
N.D.
N.D.
-0.2
stress
ALP with Fusidic 0.02 mg/ml
N.D.
-2.0
N.D.
N.D.
-0.2
stress
ALP with perchlorate 3 mM
N.D.
-2.4
N.D.
N.D.
+0.3
stress
ALP with Fusidic 0.01 mg/ml
N.D.
-2.0
N.D.
N.D.
+0.1
carbon source
D-Lactate (C)
N.D.
-1.8
N.D.
N.D.
+0.0
carbon source
propionate (C)
N.D.
-1.6
N.D.
N.D.
-0.2
stress
ALP with perchlorate 6 mM
N.D.
-2.3
N.D.
N.D.
+0.6
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
-2.0
N.D.
N.D.
+0.3
carbon source
D-Lactate (C)
N.D.
-1.8
N.D.
N.D.
+0.1
stress
ALP with perchlorate 12 mM
N.D.
-2.2
N.D.
N.D.
+0.5
stress
ALP with Chloride 75 mM
N.D.
-2.2
N.D.
N.D.
+0.5
carbon source
L-Lactate (C)
N.D.
-1.9
N.D.
N.D.
+0.2
carbon source
pyruvate (C)
N.D.
-2.0
N.D.
N.D.
+0.3
carbon source
D,L-Lactate (C)
N.D.
-1.9
N.D.
N.D.
+0.3
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
-2.1
N.D.
N.D.
+0.5
carbon source
D,L-Lactate (C)
N.D.
-1.7
N.D.
N.D.
+0.2
carbon source
pyruvate (C)
N.D.
-1.7
N.D.
N.D.
+0.2
carbon source
L-Lactate (C)
N.D.
-1.8
N.D.
N.D.
+0.4
carbon source
a-Ketoglutaric (C)
N.D.
-1.6
N.D.
N.D.
+0.2
carbon source
propionate (C)
N.D.
-1.8
N.D.
N.D.
+0.4
carbon source
a-Ketoglutaric (C)
N.D.
-1.5
N.D.
N.D.
+0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.9
N.D.
N.D.
+0.6
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
-0.4
N.D.
N.D.
+1.2
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
+0.7
N.D.
N.D.
+0.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.1
N.D.
N.D.
+1.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.1
N.D.
N.D.
+1.4
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.4
N.D.
N.D.
+1.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.2
N.D.
N.D.
+1.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.3
N.D.
N.D.
+1.6
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
+0.1
N.D.
N.D.
+1.8
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