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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2305 and Dsui_2306 are separated by 200 nucleotides
Dsui_2306 and Dsui_2307 are separated by 31 nucleotides
Dsui_2307 and Dsui_2308 are separated by 16 nucleotides
Dsui_2308 and Dsui_2309 overlap by 14 nucleotides
Dsui_2305: Dsui_2305 - electron transfer flavoprotein, beta subunit, at 2,461,989 to 2,462,738
_2305
Dsui_2306: Dsui_2306 - transcriptional regulator, at 2,462,939 to 2,463,523
_2306
Dsui_2307: Dsui_2307 - putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 2,463,555 to 2,464,214
_2307
Dsui_2308: Dsui_2308 - lysophospholipase L1-like esterase, at 2,464,231 to 2,464,854
_2308
Dsui_2309: Dsui_2309 - selenium donor protein, at 2,464,841 to 2,465,887
_2309
Group
Condition
Dsui
_2305
Dsui
_2306
Dsui
_2307
Dsui
_2308
Dsui
_2309
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-2.1
-6.1
-0.2
+0.3
+0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.5
-3.6
-0.5
+0.3
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.4
-3.9
-0.2
-0.1
+0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-2.6
-3.6
-0.5
+0.2
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.4
-3.3
-0.5
+0.2
-0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
-2.5
-2.9
-0.6
+0.1
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.8
-2.8
-0.4
+0.2
-0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.7
-3.0
-0.4
+0.1
+0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-2.4
-3.1
-0.4
+0.1
-0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-2.3
-3.3
-0.3
+0.2
-0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.7
-3.7
-0.2
-0.1
-0.6
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.9
-3.0
-0.3
+0.3
-0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.6
-2.2
-0.1
+0.0
-0.0
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-2.0
-2.1
-0.4
+0.2
+0.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.6
-2.8
-0.2
-0.2
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.7
-1.5
-0.2
-0.6
-0.8
carbon source
defined media with 30 mM sodium lactate
-1.8
-1.2
-0.1
+0.0
-0.6
stress
ALP with Cisplatin 0.0009 mg/ml
-2.1
-0.4
+0.0
-0.3
-0.7
stress
ALP with copper (II) chloride 0.6 mM
-2.8
-0.5
-0.4
+0.6
-0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.3
-1.4
-0.0
-0.0
-0.5
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.2
-1.0
-0.3
-0.3
-0.4
stress
rich media with sodium chlorite 0.16 mM
-1.0
-1.2
-0.2
-0.4
-0.3
carbon source
a-Ketoglutaric (C)
-1.2
-1.3
+0.1
-0.6
-0.0
carbon source
a-Ketoglutaric (C)
-1.0
-1.3
-0.2
+0.3
-0.4
carbon source
propionate (C)
+0.6
-2.3
-0.2
-0.1
-0.0
carbon source
propionate (C)
+0.6
-2.4
-0.2
+0.2
+0.2
stress
ALP with Fusidic 0.01 mg/ml
+1.9
-1.4
-0.5
-0.7
-0.2
stress
ALP with Fusidic 0.02 mg/ml
+1.7
-1.1
-0.4
-0.2
+0.3
stress
ALP with Fusidic 0.007 mg/ml
+1.8
-1.1
+0.2
-0.1
-0.3
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+1.4
-0.7
-0.3
+0.4
-0.3
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