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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2254 and Dsui_2255 are separated by 53 nucleotides
Dsui_2255 and Dsui_2256 are separated by 281 nucleotides
Dsui_2256 and Dsui_2257 are separated by 134 nucleotides
Dsui_2257 and Dsui_2258 are separated by 135 nucleotides
Dsui_2254: Dsui_2254 - glycine/serine hydroxymethyltransferase, at 2,403,229 to 2,404,531
_2254
Dsui_2255: Dsui_2255 - cAMP-binding protein, at 2,404,585 to 2,405,301
_2255
Dsui_2256: Dsui_2256 - flavodoxin reductase family protein, at 2,405,583 to 2,406,359
_2256
Dsui_2257: Dsui_2257 - transcriptional regulator, at 2,406,494 to 2,407,450
_2257
Dsui_2258: Dsui_2258 - cupin domain-containing protein, at 2,407,586 to 2,407,921
_2258
Group
Condition
Dsui
_2254
Dsui
_2255
Dsui
_2256
Dsui
_2257
Dsui
_2258
stress
ALP with Chloride 75 mM
-1.5
+0.0
-1.1
-0.8
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
-0.7
-0.2
-0.9
-0.9
N.D.
stress
ALP with Cobalt chloride 0.2 mM
-1.1
-0.6
-0.1
-0.5
N.D.
carbon source
a-Ketoglutaric (C)
-0.7
-0.1
-1.0
-0.3
N.D.
stress
ALP with nitrate 75 mM
-1.3
-0.0
-0.3
-0.4
N.D.
carbon source
L-Lactate (C)
-1.6
-0.2
+0.1
+0.2
N.D.
carbon source
D,L-Lactate (C)
-1.4
-0.3
+0.2
+0.2
N.D.
stress
ALP with nitrite 0.15 mM
-1.4
-0.2
+0.3
+0.1
N.D.
carbon source
pyruvate (C)
-1.5
-0.3
+0.4
+0.3
N.D.
stress
ALP with nitrite 0.3 mM
-1.4
-0.3
+0.5
+0.2
N.D.
carbon source
propionate (C)
-1.4
+0.0
+0.4
+0.2
N.D.
carbon source
L-Lactate (C)
-1.4
-0.1
+0.5
+0.4
N.D.
carbon source
propionate (C)
-1.2
+0.1
+0.4
+0.5
N.D.
stress
ALP with perchlorate 3 mM
-1.3
+0.2
+0.5
+0.5
N.D.
stress
ALP with nitrite 0.45 mM
-1.0
-0.1
+0.7
+0.4
N.D.
stress
ALP with perchlorate 6 mM
-1.6
-0.2
+1.0
+0.8
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.9
-0.0
+0.8
+0.8
N.D.
stress
ALP with perchlorate 12 mM
-1.2
-0.3
+1.3
+0.8
N.D.
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.8
+0.1
+0.8
+0.7
N.D.
stress
ALP with Fusidic 0.007 mg/ml
-1.4
+0.0
+1.2
+1.0
N.D.
stress
ALP with Fusidic 0.01 mg/ml
-1.2
-0.1
+1.5
+1.2
N.D.
stress
ALP with Fusidic 0.02 mg/ml
-0.9
-0.1
+1.4
+1.2
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.4
-0.1
+1.5
+1.6
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.0
+0.3
+0.9
+0.9
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.0
+0.2
+1.0
+0.9
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.0
+0.4
+1.0
+0.8
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.4
-0.3
+1.7
+1.7
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.6
+0.1
+2.0
+1.5
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.5
+0.0
+1.9
+1.6
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.2
+0.0
+1.9
+1.6
N.D.
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