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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2236 and Dsui_2237 overlap by 4 nucleotides
Dsui_2237 and Dsui_2238 are separated by 47 nucleotides
Dsui_2238 and Dsui_2239 are separated by 459 nucleotides
Dsui_2239 and Dsui_2240 are separated by 161 nucleotides
Dsui_2236: Dsui_2236 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 2,379,178 to 2,380,164
_2236
Dsui_2237: Dsui_2237 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 2,380,161 to 2,381,129
_2237
Dsui_2238: Dsui_2238 - ABC-type dipeptide transport system, periplasmic component, at 2,381,177 to 2,382,739
_2238
Dsui_2239: Dsui_2239 - tRNA (uracil-5-)-methyltransferase, at 2,383,199 to 2,384,287
_2239
Dsui_2240: Dsui_2240 - PAS domain S-box, at 2,384,449 to 2,388,288
_2240
Group
Condition
Dsui
_2236
Dsui
_2237
Dsui
_2238
Dsui
_2239
Dsui
_2240
alp richb
ALP
N.D.
-2.3
-2.6
+0.1
-0.9
stress
ALP with Chloride 75 mM
N.D.
-1.8
-2.2
+0.0
-1.7
stress
ALP with perchlorate 12 mM
N.D.
-1.9
-1.9
-0.1
-1.7
stress
ALP with perchlorate 6 mM
N.D.
-1.8
-1.8
-0.2
-1.8
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
-2.2
-2.5
+0.1
-0.7
stress
ALP with perchlorate 3 mM
N.D.
-1.5
-1.7
-0.3
-1.8
carbon source
pyruvate (C)
N.D.
-1.4
-2.4
-0.0
-1.5
stress
ALP with Zinc 1 mM
N.D.
-2.2
-2.5
+0.3
-0.8
stress
ALP with nitrite 0.45 mM
N.D.
-2.3
-2.0
+0.1
-1.0
carbon source
D,L-Lactate (C)
N.D.
-1.7
-1.7
-0.1
-1.6
stress
ALP with sodium fluoride 30 mM
N.D.
-1.9
-2.3
+0.1
-0.8
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
-1.5
-1.4
-0.4
-1.5
carbon source
L-Lactate (C)
N.D.
-1.2
-2.0
+0.0
-1.5
stress
ALP with Thallium(I) acetate 0.003 mg/ml
N.D.
-1.3
-2.5
+0.0
-0.9
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
-2.4
-1.5
+0.2
-0.9
stress
ALP with nitrite 0.15 mM
N.D.
-1.3
-2.5
+0.2
-1.0
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
-2.0
-2.4
+0.3
-0.4
carbon source
D,L-Lactate (C)
N.D.
-1.6
-1.4
-0.0
-1.5
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
-2.2
-1.6
-0.1
-0.5
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
-1.7
-1.3
+0.0
-1.4
carbon source
pyruvate (C)
N.D.
-1.4
-1.7
+0.1
-1.4
carbon source
propionate (C)
N.D.
-1.4
-1.4
-0.3
-1.3
carbon source
a-Ketoglutaric (C)
N.D.
-1.6
-1.5
-0.2
-1.1
stress
ALP with sodium fluoride 40 mM
N.D.
-2.0
-1.3
+0.1
-0.9
stress
ALP with nitrite 0.3 mM
N.D.
-1.2
-2.3
+0.3
-1.0
stress
ALP with Fusidic 0.007 mg/ml
N.D.
-1.9
-1.3
+0.7
-1.6
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
-2.2
-1.3
+0.4
-0.6
stress
ALP with Fusidic 0.02 mg/ml
N.D.
-1.4
-1.3
+0.8
-1.5
stress
ALP with Cobalt chloride 0.2 mM
N.D.
-2.2
-1.0
+0.5
-0.7
stress
ALP with Fusidic 0.01 mg/ml
N.D.
-0.9
-1.3
+0.8
-1.6
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