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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2225 and Dsui_2226 are separated by 229 nucleotides
Dsui_2226 and Dsui_2227 are separated by 33 nucleotides
Dsui_2227 and Dsui_2228 are separated by 75 nucleotides
Dsui_2228 and Dsui_2229 are separated by 70 nucleotides
Dsui_2225: Dsui_2225 - hypothetical protein, at 2,366,918 to 2,367,067
_2225
Dsui_2226: Dsui_2226 - DNA-binding domain-containing protein, AraC-type, at 2,367,297 to 2,368,181
_2226
Dsui_2227: Dsui_2227 - NADH-quinone oxidoreductase, B subunit, at 2,368,215 to 2,368,736
_2227
Dsui_2228: Dsui_2228 - Zn-dependent alcohol dehydrogenase, at 2,368,812 to 2,369,834
_2228
Dsui_2229: Dsui_2229 - transcriptional regulator, at 2,369,905 to 2,370,780
_2229
Group
Condition
Dsui
_2225
Dsui
_2226
Dsui
_2227
Dsui
_2228
Dsui
_2229
stress
ALP with perchlorate 12 mM
N.D.
-0.4
N.D.
-2.0
-0.3
stress
ALP with perchlorate 6 mM
N.D.
-0.4
N.D.
-2.1
-0.1
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-0.7
N.D.
-0.6
-1.3
stress
ALP with Nickel (II) chloride 1.5 mM
N.D.
-0.5
N.D.
-1.3
-0.8
carbon source
D-Lactate (C)
N.D.
-0.2
N.D.
-1.8
-0.5
stress
ALP with Chloride 75 mM
N.D.
+0.0
N.D.
-2.0
-0.5
stress
ALP with Fusidic 0.01 mg/ml
N.D.
-0.6
N.D.
-1.9
-0.0
alp richb
ALP
N.D.
-0.2
N.D.
-1.7
-0.6
carbon source
a-Ketoglutaric (C)
N.D.
-0.5
N.D.
-1.4
-0.5
carbon source
D,L-Lactate (C)
N.D.
-0.2
N.D.
-1.9
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.1
N.D.
-1.2
-0.1
carbon source
D,L-Lactate (C)
N.D.
-0.1
N.D.
-1.9
-0.3
carbon source
pyruvate (C)
N.D.
-0.3
N.D.
-1.8
-0.2
stress
ALP with Thallium(I) acetate 0.003 mg/ml
N.D.
-0.2
N.D.
-1.7
-0.4
stress
ALP with Fusidic 0.02 mg/ml
N.D.
-0.3
N.D.
-1.9
-0.2
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
-0.3
N.D.
-1.7
-0.3
carbon source
L-Lactate (C)
N.D.
-0.3
N.D.
-1.8
-0.2
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
-0.2
N.D.
-2.0
-0.1
carbon source
propionate (C)
N.D.
-0.4
N.D.
-1.5
-0.4
stress
ALP with perchlorate 3 mM
N.D.
+0.0
N.D.
-2.2
-0.1
stress
ALP with Zinc 1 mM
N.D.
+0.3
N.D.
-1.7
-0.7
stress
ALP with sodium fluoride 40 mM
N.D.
+0.2
N.D.
-1.7
-0.4
stress
ALP with nitrite 0.45 mM
N.D.
+0.2
N.D.
-1.8
-0.3
stress
ALP with Fusidic 0.007 mg/ml
N.D.
+0.2
N.D.
-2.0
-0.1
stress
ALP with nitrite 0.3 mM
N.D.
+0.3
N.D.
-1.8
-0.4
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
+0.3
N.D.
-1.7
-0.3
stress
ALP with Cobalt chloride 0.25 mM
N.D.
+0.3
N.D.
-1.4
-0.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-0.5
N.D.
-1.5
+0.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.3
N.D.
-1.4
+0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.1
N.D.
-1.6
+0.7
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