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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2197 and Dsui_2198 are separated by 114 nucleotides
Dsui_2198 and Dsui_2199 are separated by 161 nucleotides
Dsui_2199 and Dsui_2200 are separated by 28 nucleotides
Dsui_2200 and Dsui_2201 are separated by 25 nucleotides
Dsui_2197: Dsui_2197 - endopeptidase Clp ATP-binding regulatory subunit ClpX, at 2,332,683 to 2,333,957
_2197
Dsui_2198: Dsui_2198 - ATP-dependent protease La, at 2,334,072 to 2,336,489
_2198
Dsui_2199: Dsui_2199 - bacterial nucleoid DNA-binding protein, at 2,336,651 to 2,336,923
_2199
Dsui_2200: Dsui_2200 - tRNA-Val, at 2,336,952 to 2,337,027
_2200
Dsui_2201: Dsui_2201 - tRNA-Asp, at 2,337,053 to 2,337,129
_2201
Group
Condition
Dsui
_2197
Dsui
_2198
Dsui
_2199
Dsui
_2200
Dsui
_2201
stress
ALP with Cisplatin 0.0009 mg/ml
-1.7
-3.2
+0.3
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
-0.8
-3.5
-0.0
N.D.
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-1.0
-0.4
-2.5
N.D.
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
-1.5
-2.8
+0.5
N.D.
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
-1.3
-2.8
+0.4
N.D.
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
-2.7
-1.9
+1.0
N.D.
N.D.
stress
ALP with Cobalt chloride 0.25 mM
-1.7
-2.2
+0.4
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
+2.6
-2.6
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.1
+2.9
-2.3
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
+3.7
-3.4
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
+3.3
-2.9
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
+3.5
-2.7
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.1
+3.0
-1.4
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
+3.4
-2.2
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
+3.4
-2.2
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
+3.4
-2.0
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
+3.4
-1.8
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.9
+2.9
-0.9
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.0
+3.0
-0.5
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.4
+2.8
-1.0
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.0
+3.0
+0.3
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.1
+4.3
-1.2
N.D.
N.D.
stress
ALP with Fusidic 0.01 mg/ml
+1.4
+1.7
+0.6
N.D.
N.D.
stress
ALP with Fusidic 0.007 mg/ml
+1.3
+1.8
+0.7
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.3
+4.0
-0.2
N.D.
N.D.
stress
ALP with Fusidic 0.02 mg/ml
+1.5
+1.7
+1.0
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.3
+3.9
+0.0
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
+4.0
+0.1
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.6
+4.8
-0.9
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.5
+4.1
+0.3
N.D.
N.D.
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