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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2181 and Dsui_2182 are separated by 218 nucleotides
Dsui_2182 and Dsui_2183 are separated by 240 nucleotides
Dsui_2183 and Dsui_2184 are separated by 114 nucleotides
Dsui_2184 and Dsui_2185 are separated by 71 nucleotides
Dsui_2181: Dsui_2181 - DNA-binding domain-containing protein, AraC-type, at 2,316,198 to 2,316,983
_2181
Dsui_2182: Dsui_2182 - arabinose efflux permease family protein, at 2,317,202 to 2,318,506
_2182
Dsui_2183: Dsui_2183 - aldose 1-epimerase-like enzyme, at 2,318,747 to 2,319,619
_2183
Dsui_2184: Dsui_2184 - hypothetical protein, at 2,319,734 to 2,320,282
_2184
Dsui_2185: Dsui_2185 - DNA-3-methyladenine glycosylase I, at 2,320,354 to 2,320,926
_2185
Group
Condition
Dsui
_2181
Dsui
_2182
Dsui
_2183
Dsui
_2184
Dsui
_2185
stress
ALP with copper (II) chloride 0.6 mM
-1.0
N.D.
-1.4
N.D.
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
-0.2
N.D.
-2.1
N.D.
N.D.
carbon source
L-Lactate (C)
+0.2
N.D.
-1.7
N.D.
N.D.
stress
ALP with Cobalt chloride 0.25 mM
+0.1
N.D.
-1.3
N.D.
N.D.
carbon source
defined media with 40 mM sodium acetate
-0.3
N.D.
-0.7
N.D.
N.D.
carbon source
propionate (C)
-0.3
N.D.
-0.7
N.D.
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
-0.3
N.D.
-0.7
N.D.
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.2
N.D.
-0.7
N.D.
N.D.
stress
ALP with Zinc 2 mM
-0.6
N.D.
-0.3
N.D.
N.D.
stress
ALP with Nickel (II) chloride 1.5 mM
-0.4
N.D.
-0.5
N.D.
N.D.
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.8
N.D.
+0.3
N.D.
N.D.
carbon source
defined media with 30 mM sodium lactate
-0.6
N.D.
+0.1
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
+0.4
N.D.
-0.7
N.D.
N.D.
stress
ALP with Fusidic 0.007 mg/ml
+0.4
N.D.
-0.7
N.D.
N.D.
carbon source
propionate (C)
-0.6
N.D.
+0.4
N.D.
N.D.
stress
ALP with nitrate 75 mM
+0.2
N.D.
-0.4
N.D.
N.D.
carbon source
R2A with sodium pyruvate
-0.5
N.D.
+0.5
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.3
N.D.
-0.4
N.D.
N.D.
stress
ALP with Cobalt chloride 0.2 mM
+0.6
N.D.
-0.6
N.D.
N.D.
carbon source
defined media with 30 mM sodium lactate
-0.6
N.D.
+0.7
N.D.
N.D.
carbon source
L-Lactate (C)
-0.3
N.D.
+0.4
N.D.
N.D.
stress
ALP with nitrite 0.45 mM
+0.5
N.D.
-0.3
N.D.
N.D.
stress
ALP with perchlorate 3 mM
-0.2
N.D.
+0.6
N.D.
N.D.
carbon source
defined media with 40 mM sodium acetate
-0.1
N.D.
+0.7
N.D.
N.D.
carbon source
R2A with sodium pyruvate
+0.4
N.D.
+0.3
N.D.
N.D.
stress
ALP with Fusidic 0.01 mg/ml
+0.0
N.D.
+0.7
N.D.
N.D.
carbon source
defined media with 30 mM sodium lactate
-0.1
N.D.
+0.8
N.D.
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.2
N.D.
+0.5
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.4
N.D.
+0.4
N.D.
N.D.
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.2
N.D.
+0.5
N.D.
N.D.
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