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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2168 and Dsui_2169 are separated by 71 nucleotides
Dsui_2169 and Dsui_2170 overlap by 4 nucleotides
Dsui_2170 and Dsui_2171 overlap by 4 nucleotides
Dsui_2171 and Dsui_2172 are separated by 37 nucleotides
Dsui_2168: Dsui_2168 - putative hydrolase of alpha/beta superfamily, at 2,305,254 to 2,306,219
_2168
Dsui_2169: Dsui_2169 - hypothetical protein, at 2,306,291 to 2,306,572
_2169
Dsui_2170: Dsui_2170 - putative iron-regulated membrane protein, at 2,306,569 to 2,308,077
_2170
Dsui_2171: Dsui_2171 - Protein of unknown function (DUF3325), at 2,308,074 to 2,308,430
_2171
Dsui_2172: Dsui_2172 - transcriptional regulator, at 2,308,468 to 2,308,944
_2172
Group
Condition
Dsui
_2168
Dsui
_2169
Dsui
_2170
Dsui
_2171
Dsui
_2172
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
-2.1
N.D.
-2.9
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.6
N.D.
-3.0
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
-1.5
N.D.
-1.9
carbon source
R2A with sodium pyruvate
N.D.
N.D.
-0.4
N.D.
-2.8
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.7
N.D.
-1.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.6
N.D.
-1.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.8
N.D.
-1.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.7
N.D.
-1.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.9
N.D.
-1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.8
N.D.
-1.0
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
-2.1
N.D.
-0.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
-1.8
N.D.
-0.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.9
N.D.
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.7
N.D.
-0.5
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
-1.1
N.D.
-1.0
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
-0.9
N.D.
-1.1
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
-0.5
N.D.
-1.5
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.8
N.D.
-0.2
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
-1.3
N.D.
-0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-1.7
N.D.
-0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.7
N.D.
-1.1
carbon source
R2A with sodium pyruvate
N.D.
N.D.
-0.7
N.D.
-1.1
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.3
N.D.
-1.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
-0.3
N.D.
-1.2
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
-0.5
N.D.
-1.1
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
-1.7
N.D.
+0.4
stress
ALP with Zinc 1 mM
N.D.
N.D.
-1.3
N.D.
+0.2
stress
ALP with Zinc 2 mM
N.D.
N.D.
-1.1
N.D.
+0.6
stress
ALP with nitrate 50 mM
N.D.
N.D.
-0.8
N.D.
+0.7
carbon source
defined media with 30 mM sodium lactate
N.D.
N.D.
+0.5
N.D.
+1.2
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