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Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2165 and Dsui_2166 overlap by 14 nucleotides
Dsui_2166 and Dsui_2167 are separated by 101 nucleotides
Dsui_2167 and Dsui_2168 are separated by 61 nucleotides
Dsui_2168 and Dsui_2169 are separated by 71 nucleotides
Dsui_2165: Dsui_2165 - RNA polymerase sigma factor, sigma-70 family, at 2,301,233 to 2,301,748
_2165
Dsui_2166: Dsui_2166 - Fe2+-dicitrate sensor, membrane component, at 2,301,735 to 2,302,670
_2166
Dsui_2167: Dsui_2167 - TonB-dependent siderophore receptor, at 2,302,772 to 2,305,192
_2167
Dsui_2168: Dsui_2168 - putative hydrolase of alpha/beta superfamily, at 2,305,254 to 2,306,219
_2168
Dsui_2169: Dsui_2169 - hypothetical protein, at 2,306,291 to 2,306,572
_2169
Group
Condition
Dsui
_2165
Dsui
_2166
Dsui
_2167
Dsui
_2168
Dsui
_2169
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.7
-0.9
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.4
-1.0
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.3
-1.0
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.8
-0.5
N.D.
N.D.
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
-1.2
-1.0
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-1.2
-1.0
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-2.2
+0.1
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.6
-0.5
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-1.4
-0.6
N.D.
N.D.
carbon source
R2A with sodium pyruvate
N.D.
-2.0
-0.0
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.0
-0.8
N.D.
N.D.
stress
ALP with Cobalt chloride 0.2 mM
N.D.
-1.3
-0.3
N.D.
N.D.
stress
ALP with perchlorate 6 mM
N.D.
-0.4
-1.2
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-0.9
-0.7
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
-0.6
N.D.
N.D.
carbon source
pyruvate (C)
N.D.
-0.6
-0.9
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.6
-0.8
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.6
-0.8
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
-0.5
N.D.
N.D.
stress
ALP with perchlorate 12 mM
N.D.
-0.2
-1.1
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.6
-0.7
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-1.5
+0.5
N.D.
N.D.
stress
ALP with perchlorate 3 mM
N.D.
+0.3
-1.2
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-1.1
+0.3
N.D.
N.D.
carbon source
D,L-Lactate (C)
N.D.
+0.4
-1.1
N.D.
N.D.
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
+0.4
-1.0
N.D.
N.D.
stress
ALP with Fusidic 0.01 mg/ml
N.D.
+0.7
-1.0
N.D.
N.D.
carbon source
D-Lactate (C)
N.D.
+0.5
-0.8
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
+0.7
-0.6
N.D.
N.D.
stress
ALP with Fusidic 0.02 mg/ml
N.D.
+1.1
-0.9
N.D.
N.D.
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